Protein–RNA interactions for Protein: P58304

VSX2, Visual system homeobox 2, humanhuman

Predicted RBP Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VSX2P58304 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
VSX2P58304 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
VSX2P58304 LAGE3P1-201ENST00000425356 484 ntBASIC16.61■□□□□ 0.25
VSX2P58304 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC16.61■□□□□ 0.25
VSX2P58304 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC16.61■□□□□ 0.25
VSX2P58304 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC16.61■□□□□ 0.25
VSX2P58304 AC139887.3-201ENST00000568585 713 ntBASIC16.61■□□□□ 0.25
VSX2P58304 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
VSX2P58304 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC16.61■□□□□ 0.25
VSX2P58304 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC16.61■□□□□ 0.25
VSX2P58304 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC16.61■□□□□ 0.25
VSX2P58304 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
VSX2P58304 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
VSX2P58304 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
VSX2P58304 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
VSX2P58304 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
VSX2P58304 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
VSX2P58304 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
VSX2P58304 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
VSX2P58304 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
VSX2P58304 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
VSX2P58304 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC16.61■□□□□ 0.25
VSX2P58304 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
VSX2P58304 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
VSX2P58304 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
VSX2P58304 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
VSX2P58304 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
VSX2P58304 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC16.6■□□□□ 0.25
VSX2P58304 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC16.6■□□□□ 0.25
VSX2P58304 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC16.6■□□□□ 0.25
VSX2P58304 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
VSX2P58304 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC16.6■□□□□ 0.25
VSX2P58304 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
VSX2P58304 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
VSX2P58304 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC16.6■□□□□ 0.25
VSX2P58304 AC099398.1-201ENST00000567919 2776 ntBASIC16.6■□□□□ 0.25
VSX2P58304 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
VSX2P58304 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
VSX2P58304 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
VSX2P58304 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC16.6■□□□□ 0.25
VSX2P58304 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
VSX2P58304 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC16.6■□□□□ 0.25
VSX2P58304 INIP-202ENST00000374236 874 ntTSL 2 BASIC16.6■□□□□ 0.25
VSX2P58304 AL590627.1-203ENST00000421194 1026 ntBASIC16.6■□□□□ 0.25
VSX2P58304 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
VSX2P58304 AC012640.2-201ENST00000561606 901 ntBASIC16.6■□□□□ 0.25
VSX2P58304 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC16.6■□□□□ 0.25
VSX2P58304 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC16.6■□□□□ 0.25
VSX2P58304 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC16.6■□□□□ 0.25
VSX2P58304 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC16.6■□□□□ 0.25
VSX2P58304 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC16.6■□□□□ 0.25
VSX2P58304 AC008735.5-201ENST00000623544 497 ntBASIC16.6■□□□□ 0.25
VSX2P58304 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
VSX2P58304 AC243591.1-201ENST00000452967 1364 ntBASIC16.6■□□□□ 0.25
VSX2P58304 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
VSX2P58304 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
VSX2P58304 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
VSX2P58304 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC16.6■□□□□ 0.25
VSX2P58304 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
VSX2P58304 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC16.6■□□□□ 0.25
VSX2P58304 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC16.6■□□□□ 0.25
VSX2P58304 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
VSX2P58304 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
VSX2P58304 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
VSX2P58304 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC16.59■□□□□ 0.25
VSX2P58304 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC16.59■□□□□ 0.25
VSX2P58304 FST-202ENST00000396947 2538 ntTSL 5 BASIC16.59■□□□□ 0.25
VSX2P58304 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
VSX2P58304 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC16.59■□□□□ 0.25
VSX2P58304 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
VSX2P58304 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
VSX2P58304 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC16.59■□□□□ 0.25
VSX2P58304 ENSA-206ENST00000361631 725 ntTSL 2 BASIC16.59■□□□□ 0.25
VSX2P58304 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC16.59■□□□□ 0.25
VSX2P58304 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC16.59■□□□□ 0.25
VSX2P58304 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC16.59■□□□□ 0.25
VSX2P58304 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC16.59■□□□□ 0.25
VSX2P58304 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC16.59■□□□□ 0.25
VSX2P58304 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC16.59■□□□□ 0.25
VSX2P58304 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC16.59■□□□□ 0.25
VSX2P58304 AC105339.3-201ENST00000560043 636 ntBASIC16.59■□□□□ 0.25
VSX2P58304 LITAF-211ENST00000572255 516 ntTSL 4 BASIC16.59■□□□□ 0.25
VSX2P58304 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC16.59■□□□□ 0.25
VSX2P58304 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC16.59■□□□□ 0.25
VSX2P58304 WDR88-203ENST00000592765 651 ntTSL 5 BASIC16.59■□□□□ 0.25
VSX2P58304 AC120114.3-201ENST00000611923 658 ntBASIC16.59■□□□□ 0.25
VSX2P58304 AL589182.2-201ENST00000619332 1049 ntBASIC16.59■□□□□ 0.25
VSX2P58304 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC16.59■□□□□ 0.25
VSX2P58304 AC116407.3-201ENST00000623905 1129 ntBASIC16.59■□□□□ 0.25
VSX2P58304 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC16.59■□□□□ 0.25
VSX2P58304 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
VSX2P58304 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC16.59■□□□□ 0.25
VSX2P58304 GID4-202ENST00000376345 1391 ntTSL 3 BASIC16.59■□□□□ 0.25
VSX2P58304 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
VSX2P58304 NCF1C-201ENST00000438382 1427 ntBASIC16.59■□□□□ 0.25
VSX2P58304 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC16.59■□□□□ 0.25
VSX2P58304 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
VSX2P58304 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC16.59■□□□□ 0.25
VSX2P58304 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC16.59■□□□□ 0.25
VSX2P58304 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 50.6 ms