Protein–RNA interactions for Protein: P50416

CPT1A, Carnitine O-palmitoyltransferase 1, liver isoform, humanhuman

Predictions only

Length 773 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPT1AP50416 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC19.08■□□□□ 0.64
CPT1AP50416 AC005237.2-201ENST00000434368 219 ntBASIC19.08■□□□□ 0.64
CPT1AP50416 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC19.08■□□□□ 0.64
CPT1AP50416 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC19.08■□□□□ 0.64
CPT1AP50416 KRT8P48-201ENST00000515599 1220 ntBASIC19.08■□□□□ 0.64
CPT1AP50416 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.64
CPT1AP50416 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
CPT1AP50416 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC19.08■□□□□ 0.64
CPT1AP50416 AC093520.2-201ENST00000561830 333 ntBASIC19.08■□□□□ 0.64
CPT1AP50416 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC19.08■□□□□ 0.64
CPT1AP50416 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC19.08■□□□□ 0.64
CPT1AP50416 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.64
CPT1AP50416 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CPT1AP50416 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
CPT1AP50416 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC19.08■□□□□ 0.64
CPT1AP50416 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC19.08■□□□□ 0.64
CPT1AP50416 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.64
CPT1AP50416 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.64
CPT1AP50416 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC19.08■□□□□ 0.64
CPT1AP50416 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC19.08■□□□□ 0.64
CPT1AP50416 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC19.08■□□□□ 0.64
CPT1AP50416 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC19.08■□□□□ 0.64
CPT1AP50416 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
CPT1AP50416 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC19.07■□□□□ 0.64
CPT1AP50416 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CPT1AP50416 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
CPT1AP50416 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CPT1AP50416 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CPT1AP50416 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
CPT1AP50416 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CPT1AP50416 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CPT1AP50416 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CPT1AP50416 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CPT1AP50416 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CPT1AP50416 HNRNPFP1-201ENST00000391730 1133 ntBASIC19.07■□□□□ 0.64
CPT1AP50416 BCRP1-201ENST00000444246 691 ntBASIC19.07■□□□□ 0.64
CPT1AP50416 AC067863.1-201ENST00000494933 530 ntBASIC19.07■□□□□ 0.64
CPT1AP50416 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CPT1AP50416 MMP17-203ENST00000535004 719 ntTSL 3 BASIC19.07■□□□□ 0.64
CPT1AP50416 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC19.07■□□□□ 0.64
CPT1AP50416 AC005412.3-201ENST00000580309 715 ntBASIC19.07■□□□□ 0.64
CPT1AP50416 AC015911.4-201ENST00000588022 1070 ntBASIC19.07■□□□□ 0.64
CPT1AP50416 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
CPT1AP50416 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CPT1AP50416 AC020763.4-201ENST00000623414 4170 ntBASIC19.07■□□□□ 0.64
CPT1AP50416 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC19.07■□□□□ 0.64
CPT1AP50416 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
CPT1AP50416 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CPT1AP50416 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CPT1AP50416 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CPT1AP50416 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CPT1AP50416 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CPT1AP50416 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC19.06■□□□□ 0.64
CPT1AP50416 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC19.06■□□□□ 0.64
CPT1AP50416 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC19.06■□□□□ 0.64
CPT1AP50416 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC19.06■□□□□ 0.64
CPT1AP50416 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CPT1AP50416 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC19.06■□□□□ 0.64
CPT1AP50416 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CPT1AP50416 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC19.06■□□□□ 0.64
CPT1AP50416 HLA-DRB6-201ENST00000411500 1235 ntBASIC19.06■□□□□ 0.64
CPT1AP50416 TFAMP1-201ENST00000412727 736 ntBASIC19.06■□□□□ 0.64
CPT1AP50416 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC19.06■□□□□ 0.64
CPT1AP50416 AL592309.1-201ENST00000443127 649 ntBASIC19.06■□□□□ 0.64
CPT1AP50416 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC19.06■□□□□ 0.64
CPT1AP50416 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC19.06■□□□□ 0.64
CPT1AP50416 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC19.06■□□□□ 0.64
CPT1AP50416 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC19.06■□□□□ 0.64
CPT1AP50416 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC19.06■□□□□ 0.64
CPT1AP50416 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC19.06■□□□□ 0.64
CPT1AP50416 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC19.06■□□□□ 0.64
CPT1AP50416 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC19.06■□□□□ 0.64
CPT1AP50416 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC19.06■□□□□ 0.64
CPT1AP50416 AL161645.1-201ENST00000622716 1255 ntBASIC19.06■□□□□ 0.64
CPT1AP50416 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC19.06■□□□□ 0.64
CPT1AP50416 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CPT1AP50416 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC19.06■□□□□ 0.64
CPT1AP50416 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC19.06■□□□□ 0.64
CPT1AP50416 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CPT1AP50416 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
CPT1AP50416 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC19.06■□□□□ 0.64
CPT1AP50416 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CPT1AP50416 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CPT1AP50416 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC19.05■□□□□ 0.64
CPT1AP50416 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CPT1AP50416 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC19.05■□□□□ 0.64
CPT1AP50416 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CPT1AP50416 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC19.05■□□□□ 0.64
CPT1AP50416 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC19.05■□□□□ 0.64
CPT1AP50416 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CPT1AP50416 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC19.05■□□□□ 0.64
CPT1AP50416 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
CPT1AP50416 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CPT1AP50416 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CPT1AP50416 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC19.05■□□□□ 0.64
CPT1AP50416 SLBP-205ENST00000488267 987 ntTSL 2 BASIC19.05■□□□□ 0.64
CPT1AP50416 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC19.05■□□□□ 0.64
CPT1AP50416 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC19.05■□□□□ 0.64
CPT1AP50416 AC079140.1-201ENST00000508039 487 ntBASIC19.05■□□□□ 0.64
CPT1AP50416 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC19.05■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 25.6 ms