Protein–RNA interactions for Protein: P29353

SHC1, SHC-transforming protein 1, humanhuman

Predictions only

Length 583 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1P29353 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
SHC1P29353 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC15.91■□□□□ 0.14
SHC1P29353 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
SHC1P29353 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
SHC1P29353 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC15.91■□□□□ 0.14
SHC1P29353 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC15.91■□□□□ 0.14
SHC1P29353 AL121761.2-201ENST00000598007 1648 ntBASIC15.91■□□□□ 0.14
SHC1P29353 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC15.91■□□□□ 0.14
SHC1P29353 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
SHC1P29353 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC15.91■□□□□ 0.14
SHC1P29353 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
SHC1P29353 BX276092.7-203ENST00000637198 1536 ntBASIC15.91■□□□□ 0.14
SHC1P29353 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
SHC1P29353 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
SHC1P29353 FAM220CP-201ENST00000395253 831 ntBASIC15.91■□□□□ 0.14
SHC1P29353 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC15.91■□□□□ 0.14
SHC1P29353 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
SHC1P29353 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
SHC1P29353 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
SHC1P29353 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC15.91■□□□□ 0.14
SHC1P29353 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC15.91■□□□□ 0.14
SHC1P29353 DANCR-204ENST00000444958 709 ntTSL 3 BASIC15.91■□□□□ 0.14
SHC1P29353 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
SHC1P29353 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC15.91■□□□□ 0.14
SHC1P29353 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC15.91■□□□□ 0.14
SHC1P29353 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC15.91■□□□□ 0.14
SHC1P29353 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC15.91■□□□□ 0.14
SHC1P29353 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC15.91■□□□□ 0.14
SHC1P29353 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
SHC1P29353 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC15.91■□□□□ 0.14
SHC1P29353 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
SHC1P29353 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC15.91■□□□□ 0.14
SHC1P29353 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
SHC1P29353 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC15.91■□□□□ 0.14
SHC1P29353 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC15.91■□□□□ 0.14
SHC1P29353 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
SHC1P29353 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
SHC1P29353 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
SHC1P29353 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC15.91■□□□□ 0.14
SHC1P29353 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
SHC1P29353 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
SHC1P29353 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
SHC1P29353 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
SHC1P29353 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
SHC1P29353 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
SHC1P29353 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC15.9■□□□□ 0.14
SHC1P29353 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC15.9■□□□□ 0.14
SHC1P29353 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC15.9■□□□□ 0.14
SHC1P29353 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC15.9■□□□□ 0.14
SHC1P29353 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC15.9■□□□□ 0.14
SHC1P29353 CROCCP2-202ENST00000412962 2773 ntBASIC15.9■□□□□ 0.14
SHC1P29353 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC15.9■□□□□ 0.14
SHC1P29353 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC15.9■□□□□ 0.14
SHC1P29353 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
SHC1P29353 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
SHC1P29353 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
SHC1P29353 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
SHC1P29353 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC15.9■□□□□ 0.14
SHC1P29353 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
SHC1P29353 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC15.9■□□□□ 0.14
SHC1P29353 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
SHC1P29353 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
SHC1P29353 AC091304.2-201ENST00000564639 760 ntBASIC15.9■□□□□ 0.14
SHC1P29353 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC15.9■□□□□ 0.14
SHC1P29353 AL591684.3-201ENST00000605187 298 ntBASIC15.9■□□□□ 0.14
SHC1P29353 IFNL4P1-201ENST00000607083 540 ntBASIC15.9■□□□□ 0.14
SHC1P29353 AL121772.3-201ENST00000610840 674 ntBASIC15.9■□□□□ 0.14
SHC1P29353 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
SHC1P29353 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
SHC1P29353 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC15.9■□□□□ 0.14
SHC1P29353 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC15.9■□□□□ 0.14
SHC1P29353 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC15.9■□□□□ 0.14
SHC1P29353 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC15.9■□□□□ 0.14
SHC1P29353 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
SHC1P29353 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC15.9■□□□□ 0.14
SHC1P29353 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC15.9■□□□□ 0.14
SHC1P29353 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC15.9■□□□□ 0.14
SHC1P29353 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
SHC1P29353 PC-208ENST00000529047 1607 ntTSL 3 BASIC15.9■□□□□ 0.14
SHC1P29353 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
SHC1P29353 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC15.89■□□□□ 0.13
SHC1P29353 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
SHC1P29353 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
SHC1P29353 AC018695.7-201ENST00000624587 2492 ntBASIC15.89■□□□□ 0.13
SHC1P29353 LINC00304-203ENST00000565008 1864 ntBASIC15.89■□□□□ 0.13
SHC1P29353 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
SHC1P29353 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
SHC1P29353 FUOM-202ENST00000368551 628 ntTSL 3 BASIC15.89■□□□□ 0.13
SHC1P29353 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC15.89■□□□□ 0.13
SHC1P29353 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC15.89■□□□□ 0.13
SHC1P29353 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC15.89■□□□□ 0.13
SHC1P29353 KRT16P4-201ENST00000453883 522 ntBASIC15.89■□□□□ 0.13
SHC1P29353 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC15.89■□□□□ 0.13
SHC1P29353 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC15.89■□□□□ 0.13
SHC1P29353 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC15.89■□□□□ 0.13
SHC1P29353 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC15.89■□□□□ 0.13
SHC1P29353 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC15.89■□□□□ 0.13
SHC1P29353 AC019129.2-201ENST00000609837 1235 ntBASIC15.89■□□□□ 0.13
SHC1P29353 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
SHC1P29353 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms