Protein–RNA interactions for Protein: P26640

VARS, Valine--tRNA ligase, humanhuman

Known RBP Predictions only

Length 1,264 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARSP26640 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
VARSP26640 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
VARSP26640 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
VARSP26640 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC17.08■□□□□ 0.33
VARSP26640 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC17.08■□□□□ 0.32
VARSP26640 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
VARSP26640 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC17.08■□□□□ 0.32
VARSP26640 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
VARSP26640 TBC1D3P5-201ENST00000579401 1545 ntBASIC17.08■□□□□ 0.32
VARSP26640 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
VARSP26640 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
VARSP26640 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC17.08■□□□□ 0.32
VARSP26640 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC17.08■□□□□ 0.32
VARSP26640 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
VARSP26640 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
VARSP26640 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
VARSP26640 AC096633.1-201ENST00000422446 749 ntBASIC17.08■□□□□ 0.32
VARSP26640 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC17.08■□□□□ 0.32
VARSP26640 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
VARSP26640 AL662844.1-201ENST00000546340 181 ntBASIC17.08■□□□□ 0.32
VARSP26640 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC17.08■□□□□ 0.32
VARSP26640 AP005901.3-202ENST00000581653 237 ntBASIC17.08■□□□□ 0.32
VARSP26640 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
VARSP26640 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC17.08■□□□□ 0.32
VARSP26640 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
VARSP26640 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
VARSP26640 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
VARSP26640 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
VARSP26640 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
VARSP26640 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC17.08■□□□□ 0.32
VARSP26640 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
VARSP26640 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC17.08■□□□□ 0.32
VARSP26640 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
VARSP26640 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
VARSP26640 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC17.07■□□□□ 0.32
VARSP26640 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
VARSP26640 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
VARSP26640 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
VARSP26640 PCDH8P1-201ENST00000428983 2773 ntBASIC17.07■□□□□ 0.32
VARSP26640 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
VARSP26640 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC17.07■□□□□ 0.32
VARSP26640 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
VARSP26640 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
VARSP26640 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
VARSP26640 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC17.07■□□□□ 0.32
VARSP26640 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
VARSP26640 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC17.07■□□□□ 0.32
VARSP26640 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC17.07■□□□□ 0.32
VARSP26640 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC17.07■□□□□ 0.32
VARSP26640 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
VARSP26640 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
VARSP26640 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
VARSP26640 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC17.07■□□□□ 0.32
VARSP26640 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC17.07■□□□□ 0.32
VARSP26640 CALM1-205ENST00000553542 877 ntTSL 5 BASIC17.07■□□□□ 0.32
VARSP26640 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC17.07■□□□□ 0.32
VARSP26640 TBCB-205ENST00000585746 875 ntTSL 3 BASIC17.07■□□□□ 0.32
VARSP26640 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
VARSP26640 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC17.07■□□□□ 0.32
VARSP26640 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
VARSP26640 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
VARSP26640 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC17.07■□□□□ 0.32
VARSP26640 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC17.07■□□□□ 0.32
VARSP26640 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
VARSP26640 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
VARSP26640 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
VARSP26640 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC17.07■□□□□ 0.32
VARSP26640 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC17.07■□□□□ 0.32
VARSP26640 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
VARSP26640 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
VARSP26640 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
VARSP26640 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
VARSP26640 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
VARSP26640 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
VARSP26640 BX276092.7-203ENST00000637198 1536 ntBASIC17.06■□□□□ 0.32
VARSP26640 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
VARSP26640 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC17.06■□□□□ 0.32
VARSP26640 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC17.06■□□□□ 0.32
VARSP26640 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
VARSP26640 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
VARSP26640 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
VARSP26640 AC125634.1-201ENST00000438758 1403 ntBASIC17.06■□□□□ 0.32
VARSP26640 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
VARSP26640 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC17.06■□□□□ 0.32
VARSP26640 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
VARSP26640 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC17.06■□□□□ 0.32
VARSP26640 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
VARSP26640 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC17.06■□□□□ 0.32
VARSP26640 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
VARSP26640 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
VARSP26640 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
VARSP26640 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC17.06■□□□□ 0.32
VARSP26640 TSPY19P-201ENST00000418461 509 ntBASIC17.06■□□□□ 0.32
VARSP26640 DRAXINP1-201ENST00000437611 948 ntBASIC17.06■□□□□ 0.32
VARSP26640 TSPY18P-201ENST00000441642 509 ntBASIC17.06■□□□□ 0.32
VARSP26640 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
VARSP26640 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
VARSP26640 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC17.06■□□□□ 0.32
VARSP26640 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC17.06■□□□□ 0.32
VARSP26640 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 55 ms