Protein–RNA interactions for Protein: P07197

NEFM, Neurofilament medium polypeptide, humanhuman

Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEFMP07197 AP001005.1-201ENST00000571755 1248 ntBASIC23.19■■□□□ 1.3
NEFMP07197 STK25P1-201ENST00000585406 838 ntBASIC23.19■■□□□ 1.3
NEFMP07197 SLC25A6P4-201ENST00000586535 553 ntBASIC23.19■■□□□ 1.3
NEFMP07197 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
NEFMP07197 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC23.19■■□□□ 1.3
NEFMP07197 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC23.19■■□□□ 1.3
NEFMP07197 HARS-201ENST00000307633 1780 ntTSL 2 BASIC23.19■■□□□ 1.3
NEFMP07197 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
NEFMP07197 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
NEFMP07197 AC006116.8-202ENST00000587620 1550 ntBASIC23.18■■□□□ 1.3
NEFMP07197 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
NEFMP07197 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC23.18■■□□□ 1.3
NEFMP07197 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
NEFMP07197 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
NEFMP07197 PCDHA12-202ENST00000613593 2588 ntBASIC23.18■■□□□ 1.3
NEFMP07197 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC23.18■■□□□ 1.3
NEFMP07197 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC23.18■■□□□ 1.3
NEFMP07197 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC23.18■■□□□ 1.3
NEFMP07197 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC23.18■■□□□ 1.3
NEFMP07197 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
NEFMP07197 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC23.18■■□□□ 1.3
NEFMP07197 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
NEFMP07197 MRPL3P1-201ENST00000400109 1033 ntBASIC23.18■■□□□ 1.3
NEFMP07197 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
NEFMP07197 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC23.18■■□□□ 1.3
NEFMP07197 BX005266.1-201ENST00000473402 457 ntBASIC23.18■■□□□ 1.3
NEFMP07197 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC23.18■■□□□ 1.3
NEFMP07197 MTDHP4-201ENST00000600287 670 ntBASIC23.18■■□□□ 1.3
NEFMP07197 AC073592.4-201ENST00000623827 446 ntBASIC23.18■■□□□ 1.3
NEFMP07197 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
NEFMP07197 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
NEFMP07197 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC23.18■■□□□ 1.3
NEFMP07197 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
NEFMP07197 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC23.18■■□□□ 1.3
NEFMP07197 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC23.18■■□□□ 1.3
NEFMP07197 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC23.18■■□□□ 1.3
NEFMP07197 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
NEFMP07197 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
NEFMP07197 AC124067.4-201ENST00000519691 2379 ntBASIC23.18■■□□□ 1.3
NEFMP07197 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC23.17■■□□□ 1.3
NEFMP07197 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC23.17■■□□□ 1.3
NEFMP07197 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC23.17■■□□□ 1.3
NEFMP07197 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
NEFMP07197 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC23.17■■□□□ 1.3
NEFMP07197 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
NEFMP07197 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
NEFMP07197 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC23.17■■□□□ 1.3
NEFMP07197 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC23.17■■□□□ 1.3
NEFMP07197 AC079776.4-201ENST00000511039 504 ntBASIC23.17■■□□□ 1.3
NEFMP07197 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC23.17■■□□□ 1.3
NEFMP07197 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC23.17■■□□□ 1.3
NEFMP07197 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC23.17■■□□□ 1.3
NEFMP07197 REXO1L11P-201ENST00000620964 1927 ntBASIC23.17■■□□□ 1.3
NEFMP07197 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC23.17■■□□□ 1.3
NEFMP07197 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC23.17■■□□□ 1.3
NEFMP07197 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
NEFMP07197 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC23.17■■□□□ 1.3
NEFMP07197 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
NEFMP07197 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
NEFMP07197 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC23.16■■□□□ 1.3
NEFMP07197 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
NEFMP07197 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
NEFMP07197 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC23.16■■□□□ 1.3
NEFMP07197 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
NEFMP07197 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC23.16■■□□□ 1.3
NEFMP07197 PRYP5-201ENST00000451909 266 ntBASIC23.16■■□□□ 1.3
NEFMP07197 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC23.16■■□□□ 1.3
NEFMP07197 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC23.16■■□□□ 1.3
NEFMP07197 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC23.16■■□□□ 1.3
NEFMP07197 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC23.16■■□□□ 1.3
NEFMP07197 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC23.16■■□□□ 1.3
NEFMP07197 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC23.16■■□□□ 1.3
NEFMP07197 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
NEFMP07197 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC23.16■■□□□ 1.3
NEFMP07197 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC23.16■■□□□ 1.3
NEFMP07197 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
NEFMP07197 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC23.16■■□□□ 1.3
NEFMP07197 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC23.16■■□□□ 1.3
NEFMP07197 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
NEFMP07197 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
NEFMP07197 GATB-213ENST00000515812 1893 ntTSL 5 BASIC23.15■■□□□ 1.3
NEFMP07197 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC23.15■■□□□ 1.3
NEFMP07197 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC23.15■■□□□ 1.3
NEFMP07197 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
NEFMP07197 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
NEFMP07197 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
NEFMP07197 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
NEFMP07197 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC23.15■■□□□ 1.3
NEFMP07197 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC23.15■■□□□ 1.3
NEFMP07197 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
NEFMP07197 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
NEFMP07197 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
NEFMP07197 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
NEFMP07197 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC23.15■■□□□ 1.3
NEFMP07197 AL031284.1-201ENST00000419297 478 ntBASIC23.15■■□□□ 1.3
NEFMP07197 AC018712.1-201ENST00000455767 687 ntBASIC23.15■■□□□ 1.3
NEFMP07197 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC23.15■■□□□ 1.3
NEFMP07197 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC23.15■■□□□ 1.3
NEFMP07197 OR7E14P-202ENST00000530490 1290 ntBASIC23.15■■□□□ 1.3
NEFMP07197 PNMT-203ENST00000581428 677 ntTSL 2 BASIC23.15■■□□□ 1.3
Retrieved 100 of 98,524 protein–RNA pairs in 63.2 ms