Protein–RNA interactions for Protein: O76031

CLPX, ATP-dependent Clp protease ATP-binding subunit clpX-like, mitochondrial, humanhuman

Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPXO76031 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CLPXO76031 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC15.79■□□□□ 0.12
CLPXO76031 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
CLPXO76031 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
CLPXO76031 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
CLPXO76031 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CLPXO76031 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC15.79■□□□□ 0.12
CLPXO76031 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
CLPXO76031 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC15.79■□□□□ 0.12
CLPXO76031 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC15.79■□□□□ 0.12
CLPXO76031 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC15.79■□□□□ 0.12
CLPXO76031 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
CLPXO76031 AC004980.1-204ENST00000429707 299 ntBASIC15.79■□□□□ 0.12
CLPXO76031 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CLPXO76031 PPP1R14BP5-201ENST00000440334 435 ntBASIC15.79■□□□□ 0.12
CLPXO76031 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC15.79■□□□□ 0.12
CLPXO76031 GLRB-205ENST00000512619 728 ntTSL 3 BASIC15.79■□□□□ 0.12
CLPXO76031 AL355075.4-201ENST00000554988 638 ntBASIC15.79■□□□□ 0.12
CLPXO76031 AC012306.2-201ENST00000609350 630 ntBASIC15.79■□□□□ 0.12
CLPXO76031 AL031985.4-201ENST00000642138 673 ntBASIC15.79■□□□□ 0.12
CLPXO76031 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC15.79■□□□□ 0.12
CLPXO76031 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CLPXO76031 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
CLPXO76031 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CLPXO76031 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC15.79■□□□□ 0.12
CLPXO76031 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CLPXO76031 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CLPXO76031 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC15.79■□□□□ 0.12
CLPXO76031 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC15.79■□□□□ 0.12
CLPXO76031 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC15.79■□□□□ 0.12
CLPXO76031 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CLPXO76031 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
CLPXO76031 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CLPXO76031 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CLPXO76031 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC15.79■□□□□ 0.12
CLPXO76031 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
CLPXO76031 F11R-206ENST00000621309 4770 ntTSL 5 BASIC15.79■□□□□ 0.12
CLPXO76031 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
CLPXO76031 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CLPXO76031 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CLPXO76031 CYP51A1-201ENST00000003100 3210 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CLPXO76031 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CLPXO76031 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CLPXO76031 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC15.78■□□□□ 0.12
CLPXO76031 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
CLPXO76031 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CLPXO76031 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CLPXO76031 ENSA-205ENST00000361532 792 ntTSL 2 BASIC15.78■□□□□ 0.12
CLPXO76031 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
CLPXO76031 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CLPXO76031 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC15.78■□□□□ 0.12
CLPXO76031 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC15.78■□□□□ 0.12
CLPXO76031 Z85996.1-201ENST00000494644 937 ntBASIC15.78■□□□□ 0.12
CLPXO76031 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC15.78■□□□□ 0.12
CLPXO76031 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC15.78■□□□□ 0.12
CLPXO76031 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC15.78■□□□□ 0.12
CLPXO76031 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC15.78■□□□□ 0.12
CLPXO76031 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC15.78■□□□□ 0.12
CLPXO76031 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC15.78■□□□□ 0.12
CLPXO76031 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC15.78■□□□□ 0.12
CLPXO76031 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC15.78■□□□□ 0.12
CLPXO76031 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CLPXO76031 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
CLPXO76031 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CLPXO76031 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CLPXO76031 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CLPXO76031 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC15.78■□□□□ 0.12
CLPXO76031 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
CLPXO76031 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
CLPXO76031 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC15.77■□□□□ 0.12
CLPXO76031 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.12
CLPXO76031 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
CLPXO76031 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
CLPXO76031 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
CLPXO76031 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
CLPXO76031 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC15.77■□□□□ 0.12
CLPXO76031 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC15.77■□□□□ 0.12
CLPXO76031 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC15.77■□□□□ 0.12
CLPXO76031 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
CLPXO76031 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
CLPXO76031 TSPY15P-201ENST00000457163 923 ntBASIC15.77■□□□□ 0.12
CLPXO76031 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC15.77■□□□□ 0.12
CLPXO76031 DUTP2-201ENST00000519164 463 ntBASIC15.77■□□□□ 0.12
CLPXO76031 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC15.77■□□□□ 0.12
CLPXO76031 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC15.77■□□□□ 0.12
CLPXO76031 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC15.77■□□□□ 0.12
CLPXO76031 CD177P1-201ENST00000606252 935 ntBASIC15.77■□□□□ 0.12
CLPXO76031 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC15.77■□□□□ 0.11
CLPXO76031 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC15.77■□□□□ 0.11
CLPXO76031 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
CLPXO76031 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
CLPXO76031 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
CLPXO76031 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
CLPXO76031 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
CLPXO76031 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC15.77■□□□□ 0.11
CLPXO76031 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
CLPXO76031 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC15.77■□□□□ 0.11
CLPXO76031 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
CLPXO76031 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.11
CLPXO76031 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms