Protein–RNA interactions for Protein: O60890

OPHN1, Oligophrenin-1, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
OPHN1O60890 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
OPHN1O60890 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
OPHN1O60890 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC18.12■□□□□ 0.49
OPHN1O60890 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC18.12■□□□□ 0.49
OPHN1O60890 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
OPHN1O60890 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC18.12■□□□□ 0.49
OPHN1O60890 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
OPHN1O60890 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
OPHN1O60890 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
OPHN1O60890 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
OPHN1O60890 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
OPHN1O60890 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
OPHN1O60890 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
OPHN1O60890 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
OPHN1O60890 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
OPHN1O60890 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
OPHN1O60890 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
OPHN1O60890 MIR1233-2-201ENST00000408138 82 ntBASIC18.12■□□□□ 0.49
OPHN1O60890 MIR1233-1-201ENST00000408722 82 ntBASIC18.12■□□□□ 0.49
OPHN1O60890 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
OPHN1O60890 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC18.12■□□□□ 0.49
OPHN1O60890 AF186996.4-201ENST00000467186 377 ntBASIC18.12■□□□□ 0.49
OPHN1O60890 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC18.12■□□□□ 0.49
OPHN1O60890 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
OPHN1O60890 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC18.12■□□□□ 0.49
OPHN1O60890 AC011840.4-201ENST00000578471 627 ntBASIC18.12■□□□□ 0.49
OPHN1O60890 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC18.12■□□□□ 0.49
OPHN1O60890 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
OPHN1O60890 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
OPHN1O60890 TP73-AS1-207ENST00000624167 988 ntBASIC18.12■□□□□ 0.49
OPHN1O60890 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC18.12■□□□□ 0.49
OPHN1O60890 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC18.12■□□□□ 0.49
OPHN1O60890 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC18.12■□□□□ 0.49
OPHN1O60890 BOC-212ENST00000485230 2173 ntTSL 2 BASIC18.12■□□□□ 0.49
OPHN1O60890 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
OPHN1O60890 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
OPHN1O60890 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
OPHN1O60890 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
OPHN1O60890 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
OPHN1O60890 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC18.12■□□□□ 0.49
OPHN1O60890 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC18.12■□□□□ 0.49
OPHN1O60890 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC18.12■□□□□ 0.49
OPHN1O60890 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
OPHN1O60890 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
OPHN1O60890 AL023806.1-201ENST00000603994 1649 ntBASIC18.12■□□□□ 0.49
OPHN1O60890 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC18.12■□□□□ 0.49
OPHN1O60890 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
OPHN1O60890 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
OPHN1O60890 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
OPHN1O60890 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
OPHN1O60890 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
OPHN1O60890 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
OPHN1O60890 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
OPHN1O60890 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
OPHN1O60890 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC18.11■□□□□ 0.49
OPHN1O60890 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
OPHN1O60890 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
OPHN1O60890 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
OPHN1O60890 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
OPHN1O60890 POM121L3P-201ENST00000419331 1163 ntBASIC18.11■□□□□ 0.49
OPHN1O60890 AC096633.1-201ENST00000422446 749 ntBASIC18.11■□□□□ 0.49
OPHN1O60890 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC18.11■□□□□ 0.49
OPHN1O60890 RN7SL606P-201ENST00000472779 293 ntBASIC18.11■□□□□ 0.49
OPHN1O60890 IRF8-202ENST00000562492 946 ntTSL 3 BASIC18.11■□□□□ 0.49
OPHN1O60890 IGHV3OR16-7-201ENST00000604106 360 ntBASIC18.11■□□□□ 0.49
OPHN1O60890 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
OPHN1O60890 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
OPHN1O60890 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC18.11■□□□□ 0.49
OPHN1O60890 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC18.11■□□□□ 0.49
OPHN1O60890 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
OPHN1O60890 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC18.11■□□□□ 0.49
OPHN1O60890 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
OPHN1O60890 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC18.11■□□□□ 0.49
OPHN1O60890 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
OPHN1O60890 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
OPHN1O60890 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC18.11■□□□□ 0.49
OPHN1O60890 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
OPHN1O60890 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC18.1■□□□□ 0.49
OPHN1O60890 PCDHA12-202ENST00000613593 2588 ntBASIC18.1■□□□□ 0.49
OPHN1O60890 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
OPHN1O60890 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
OPHN1O60890 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
OPHN1O60890 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
OPHN1O60890 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
OPHN1O60890 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
OPHN1O60890 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
OPHN1O60890 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
OPHN1O60890 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
OPHN1O60890 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
OPHN1O60890 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC18.1■□□□□ 0.49
OPHN1O60890 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
OPHN1O60890 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
OPHN1O60890 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC18.1■□□□□ 0.49
OPHN1O60890 OR6D1P-203ENST00000641209 4860 ntBASIC18.1■□□□□ 0.49
OPHN1O60890 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
OPHN1O60890 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
OPHN1O60890 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
OPHN1O60890 MED22-202ENST00000371999 987 ntTSL 3 BASIC18.1■□□□□ 0.49
OPHN1O60890 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
OPHN1O60890 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC18.1■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms