Protein–RNA interactions for Protein: O60662

KLHL41, Kelch-like protein 41, humanhuman

Predictions only

Length 606 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KLHL41O60662 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
KLHL41O60662 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
KLHL41O60662 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC17.24■□□□□ 0.35
KLHL41O60662 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC17.24■□□□□ 0.35
KLHL41O60662 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
KLHL41O60662 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC17.24■□□□□ 0.35
KLHL41O60662 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
KLHL41O60662 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
KLHL41O60662 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
KLHL41O60662 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
KLHL41O60662 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC17.24■□□□□ 0.35
KLHL41O60662 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
KLHL41O60662 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
KLHL41O60662 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
KLHL41O60662 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
KLHL41O60662 AC004870.1-201ENST00000315132 882 ntBASIC17.24■□□□□ 0.35
KLHL41O60662 MIR662-201ENST00000384847 95 ntBASIC17.24■□□□□ 0.35
KLHL41O60662 NUS1P1-201ENST00000446295 882 ntBASIC17.24■□□□□ 0.35
KLHL41O60662 FAAHP1-202ENST00000446499 1238 ntBASIC17.24■□□□□ 0.35
KLHL41O60662 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC17.24■□□□□ 0.35
KLHL41O60662 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC17.24■□□□□ 0.35
KLHL41O60662 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC17.24■□□□□ 0.35
KLHL41O60662 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
KLHL41O60662 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC17.24■□□□□ 0.35
KLHL41O60662 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC17.24■□□□□ 0.35
KLHL41O60662 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
KLHL41O60662 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
KLHL41O60662 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC17.24■□□□□ 0.35
KLHL41O60662 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
KLHL41O60662 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
KLHL41O60662 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
KLHL41O60662 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC17.24■□□□□ 0.35
KLHL41O60662 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC17.24■□□□□ 0.35
KLHL41O60662 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
KLHL41O60662 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC17.24■□□□□ 0.35
KLHL41O60662 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
KLHL41O60662 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
KLHL41O60662 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
KLHL41O60662 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
KLHL41O60662 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC17.23■□□□□ 0.35
KLHL41O60662 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
KLHL41O60662 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
KLHL41O60662 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC17.23■□□□□ 0.35
KLHL41O60662 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC17.23■□□□□ 0.35
KLHL41O60662 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
KLHL41O60662 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
KLHL41O60662 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
KLHL41O60662 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
KLHL41O60662 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
KLHL41O60662 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
KLHL41O60662 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC17.23■□□□□ 0.35
KLHL41O60662 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC17.23■□□□□ 0.35
KLHL41O60662 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC17.23■□□□□ 0.35
KLHL41O60662 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
KLHL41O60662 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC17.23■□□□□ 0.35
KLHL41O60662 AC092119.3-201ENST00000612618 583 ntBASIC17.23■□□□□ 0.35
KLHL41O60662 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
KLHL41O60662 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC17.23■□□□□ 0.35
KLHL41O60662 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
KLHL41O60662 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
KLHL41O60662 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC17.23■□□□□ 0.35
KLHL41O60662 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
KLHL41O60662 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
KLHL41O60662 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
KLHL41O60662 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC17.23■□□□□ 0.35
KLHL41O60662 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC17.23■□□□□ 0.35
KLHL41O60662 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
KLHL41O60662 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
KLHL41O60662 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
KLHL41O60662 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC17.22■□□□□ 0.35
KLHL41O60662 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC17.22■□□□□ 0.35
KLHL41O60662 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC17.22■□□□□ 0.35
KLHL41O60662 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
KLHL41O60662 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
KLHL41O60662 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC17.22■□□□□ 0.35
KLHL41O60662 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
KLHL41O60662 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC17.22■□□□□ 0.35
KLHL41O60662 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
KLHL41O60662 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
KLHL41O60662 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
KLHL41O60662 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC17.22■□□□□ 0.35
KLHL41O60662 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
KLHL41O60662 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC17.22■□□□□ 0.35
KLHL41O60662 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
KLHL41O60662 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC17.22■□□□□ 0.35
KLHL41O60662 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC17.22■□□□□ 0.35
KLHL41O60662 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
KLHL41O60662 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
KLHL41O60662 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC17.22■□□□□ 0.35
KLHL41O60662 IL11-204ENST00000590625 1028 ntTSL 2 BASIC17.22■□□□□ 0.35
KLHL41O60662 AL121894.2-201ENST00000602977 491 ntBASIC17.22■□□□□ 0.35
KLHL41O60662 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
KLHL41O60662 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
KLHL41O60662 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC17.22■□□□□ 0.35
KLHL41O60662 AC016734.2-201ENST00000624325 1377 ntBASIC17.22■□□□□ 0.35
KLHL41O60662 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
KLHL41O60662 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
KLHL41O60662 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC17.22■□□□□ 0.35
KLHL41O60662 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC17.22■□□□□ 0.35
KLHL41O60662 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC17.22■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms