Protein–RNA interactions for Protein: O43541

SMAD6, Mothers against decapentaplegic homolog 6, humanhuman

Known RBP Predictions only

Length 496 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6O43541 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC17.47■□□□□ 0.39
SMAD6O43541 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
SMAD6O43541 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
SMAD6O43541 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SMAD6O43541 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC17.47■□□□□ 0.39
SMAD6O43541 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SMAD6O43541 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
SMAD6O43541 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SMAD6O43541 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
SMAD6O43541 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SMAD6O43541 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC17.46■□□□□ 0.39
SMAD6O43541 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
SMAD6O43541 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
SMAD6O43541 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SMAD6O43541 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SMAD6O43541 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC17.46■□□□□ 0.39
SMAD6O43541 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC17.46■□□□□ 0.39
SMAD6O43541 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SMAD6O43541 NABP1-203ENST00000409510 843 ntTSL 5 BASIC17.46■□□□□ 0.39
SMAD6O43541 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC17.46■□□□□ 0.39
SMAD6O43541 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
SMAD6O43541 KRT18P3-201ENST00000451602 1288 ntBASIC17.46■□□□□ 0.39
SMAD6O43541 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC17.46■□□□□ 0.39
SMAD6O43541 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC17.46■□□□□ 0.39
SMAD6O43541 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC17.46■□□□□ 0.39
SMAD6O43541 PGAM5P1-201ENST00000518923 814 ntBASIC17.46■□□□□ 0.39
SMAD6O43541 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC17.46■□□□□ 0.39
SMAD6O43541 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC17.46■□□□□ 0.39
SMAD6O43541 CALM1-205ENST00000553542 877 ntTSL 5 BASIC17.46■□□□□ 0.39
SMAD6O43541 MIR4751-201ENST00000578027 74 ntBASIC17.46■□□□□ 0.39
SMAD6O43541 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC17.46■□□□□ 0.39
SMAD6O43541 FAM197Y3-203ENST00000618346 717 ntBASIC17.46■□□□□ 0.39
SMAD6O43541 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC17.46■□□□□ 0.39
SMAD6O43541 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
SMAD6O43541 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC17.46■□□□□ 0.39
SMAD6O43541 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SMAD6O43541 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SMAD6O43541 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
SMAD6O43541 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SMAD6O43541 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SMAD6O43541 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SMAD6O43541 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
SMAD6O43541 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC17.46■□□□□ 0.39
SMAD6O43541 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC17.46■□□□□ 0.38
SMAD6O43541 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC17.46■□□□□ 0.38
SMAD6O43541 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC17.46■□□□□ 0.38
SMAD6O43541 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC17.46■□□□□ 0.38
SMAD6O43541 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC17.46■□□□□ 0.38
SMAD6O43541 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC17.46■□□□□ 0.38
SMAD6O43541 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC17.46■□□□□ 0.38
SMAD6O43541 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC17.46■□□□□ 0.38
SMAD6O43541 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC17.45■□□□□ 0.38
SMAD6O43541 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SMAD6O43541 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC17.45■□□□□ 0.38
SMAD6O43541 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
SMAD6O43541 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
SMAD6O43541 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC17.45■□□□□ 0.38
SMAD6O43541 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC17.45■□□□□ 0.38
SMAD6O43541 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC17.45■□□□□ 0.38
SMAD6O43541 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
SMAD6O43541 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SMAD6O43541 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SMAD6O43541 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
SMAD6O43541 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
SMAD6O43541 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
SMAD6O43541 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC17.45■□□□□ 0.38
SMAD6O43541 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
SMAD6O43541 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC17.45■□□□□ 0.38
SMAD6O43541 KRT18P2-201ENST00000447938 1258 ntBASIC17.45■□□□□ 0.38
SMAD6O43541 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC17.45■□□□□ 0.38
SMAD6O43541 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC17.45■□□□□ 0.38
SMAD6O43541 OR7E47P-204ENST00000575924 449 ntBASIC17.45■□□□□ 0.38
SMAD6O43541 TCAP-202ENST00000578283 583 ntTSL 5 BASIC17.45■□□□□ 0.38
SMAD6O43541 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC17.45■□□□□ 0.38
SMAD6O43541 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC17.45■□□□□ 0.38
SMAD6O43541 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC17.45■□□□□ 0.38
SMAD6O43541 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
SMAD6O43541 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
SMAD6O43541 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SMAD6O43541 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
SMAD6O43541 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
SMAD6O43541 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SMAD6O43541 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
SMAD6O43541 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC17.45■□□□□ 0.38
SMAD6O43541 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
SMAD6O43541 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
SMAD6O43541 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SMAD6O43541 PMS2P7-201ENST00000506558 1336 ntBASIC17.45■□□□□ 0.38
SMAD6O43541 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
SMAD6O43541 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
SMAD6O43541 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
SMAD6O43541 BCL2-203ENST00000589955 5011 ntBASIC17.44■□□□□ 0.38
SMAD6O43541 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SMAD6O43541 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
SMAD6O43541 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC17.44■□□□□ 0.38
SMAD6O43541 VN2R19P-201ENST00000442399 1052 ntBASIC17.44■□□□□ 0.38
SMAD6O43541 AL591424.1-201ENST00000442569 1213 ntBASIC17.44■□□□□ 0.38
SMAD6O43541 HS6ST1P1-201ENST00000481504 1234 ntBASIC17.44■□□□□ 0.38
SMAD6O43541 NMU-202ENST00000505262 693 ntTSL 3 BASIC17.44■□□□□ 0.38
SMAD6O43541 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC17.44■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 46.8 ms