Protein–RNA interactions for Protein: O43405

COCH, Cochlin, humanhuman

Predictions only

Length 550 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COCHO43405 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC17.83■□□□□ 0.45
COCHO43405 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC17.83■□□□□ 0.44
COCHO43405 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC17.83■□□□□ 0.44
COCHO43405 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC17.83■□□□□ 0.44
COCHO43405 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC17.83■□□□□ 0.44
COCHO43405 KRT19P2-202ENST00000557173 1012 ntBASIC17.83■□□□□ 0.44
COCHO43405 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC17.83■□□□□ 0.44
COCHO43405 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC17.83■□□□□ 0.44
COCHO43405 AL691403.2-201ENST00000618460 490 ntBASIC17.83■□□□□ 0.44
COCHO43405 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC17.83■□□□□ 0.44
COCHO43405 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
COCHO43405 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
COCHO43405 AC067852.2-201ENST00000590513 2313 ntBASIC17.83■□□□□ 0.44
COCHO43405 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
COCHO43405 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
COCHO43405 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC17.83■□□□□ 0.44
COCHO43405 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
COCHO43405 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
COCHO43405 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
COCHO43405 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC17.83■□□□□ 0.44
COCHO43405 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
COCHO43405 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
COCHO43405 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
COCHO43405 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
COCHO43405 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
COCHO43405 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC17.82■□□□□ 0.44
COCHO43405 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
COCHO43405 COA5-202ENST00000409997 557 ntTSL 4 BASIC17.82■□□□□ 0.44
COCHO43405 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC17.82■□□□□ 0.44
COCHO43405 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC17.82■□□□□ 0.44
COCHO43405 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC17.82■□□□□ 0.44
COCHO43405 FAM185BP-201ENST00000443595 716 ntBASIC17.82■□□□□ 0.44
COCHO43405 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC17.82■□□□□ 0.44
COCHO43405 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC17.82■□□□□ 0.44
COCHO43405 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC17.82■□□□□ 0.44
COCHO43405 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC17.82■□□□□ 0.44
COCHO43405 PDPK2P-202ENST00000562415 1191 ntBASIC17.82■□□□□ 0.44
COCHO43405 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
COCHO43405 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC17.82■□□□□ 0.44
COCHO43405 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
COCHO43405 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
COCHO43405 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
COCHO43405 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
COCHO43405 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
COCHO43405 AC025580.3-201ENST00000617932 1424 ntBASIC17.81■□□□□ 0.44
COCHO43405 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
COCHO43405 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
COCHO43405 AL133373.2-201ENST00000623187 2828 ntBASIC17.81■□□□□ 0.44
COCHO43405 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
COCHO43405 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC17.81■□□□□ 0.44
COCHO43405 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
COCHO43405 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC17.81■□□□□ 0.44
COCHO43405 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC17.81■□□□□ 0.44
COCHO43405 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
COCHO43405 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
COCHO43405 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC17.81■□□□□ 0.44
COCHO43405 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
COCHO43405 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
COCHO43405 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC17.81■□□□□ 0.44
COCHO43405 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC17.81■□□□□ 0.44
COCHO43405 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC17.81■□□□□ 0.44
COCHO43405 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC17.81■□□□□ 0.44
COCHO43405 ACTL9-202ENST00000612068 1252 ntBASIC17.81■□□□□ 0.44
COCHO43405 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC17.81■□□□□ 0.44
COCHO43405 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC17.81■□□□□ 0.44
COCHO43405 AL138688.1-201ENST00000624851 1594 ntBASIC17.81■□□□□ 0.44
COCHO43405 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC17.81■□□□□ 0.44
COCHO43405 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
COCHO43405 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC17.81■□□□□ 0.44
COCHO43405 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
COCHO43405 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
COCHO43405 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC17.81■□□□□ 0.44
COCHO43405 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
COCHO43405 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC17.81■□□□□ 0.44
COCHO43405 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
COCHO43405 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
COCHO43405 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC17.81■□□□□ 0.44
COCHO43405 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
COCHO43405 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
COCHO43405 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC17.8■□□□□ 0.44
COCHO43405 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
COCHO43405 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
COCHO43405 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
COCHO43405 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
COCHO43405 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
COCHO43405 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC17.8■□□□□ 0.44
COCHO43405 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
COCHO43405 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC17.8■□□□□ 0.44
COCHO43405 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC17.8■□□□□ 0.44
COCHO43405 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
COCHO43405 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
COCHO43405 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC17.8■□□□□ 0.44
COCHO43405 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
COCHO43405 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC17.8■□□□□ 0.44
COCHO43405 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
COCHO43405 ALG1L5P-201ENST00000482043 771 ntBASIC17.8■□□□□ 0.44
COCHO43405 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC17.8■□□□□ 0.44
COCHO43405 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC17.8■□□□□ 0.44
COCHO43405 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC17.8■□□□□ 0.44
COCHO43405 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC17.8■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms