Protein–RNA interactions for Protein: Q9Y5F2

PCDHB11, Protocadherin beta-11, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11Q9Y5F2 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC17.02■□□□□ 0.32
PCDHB11Q9Y5F2 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
PCDHB11Q9Y5F2 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
PCDHB11Q9Y5F2 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
PCDHB11Q9Y5F2 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
PCDHB11Q9Y5F2 PP12613-201ENST00000424958 2230 ntBASIC17.02■□□□□ 0.32
PCDHB11Q9Y5F2 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC17.02■□□□□ 0.32
PCDHB11Q9Y5F2 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC17.02■□□□□ 0.32
PCDHB11Q9Y5F2 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC17.02■□□□□ 0.32
PCDHB11Q9Y5F2 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC17.02■□□□□ 0.32
PCDHB11Q9Y5F2 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC17.02■□□□□ 0.31
PCDHB11Q9Y5F2 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC17.02■□□□□ 0.31
PCDHB11Q9Y5F2 AC104109.2-201ENST00000602919 1418 ntBASIC17.02■□□□□ 0.31
PCDHB11Q9Y5F2 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
PCDHB11Q9Y5F2 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC17.02■□□□□ 0.31
PCDHB11Q9Y5F2 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.31
PCDHB11Q9Y5F2 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.31
PCDHB11Q9Y5F2 HARS-201ENST00000307633 1780 ntTSL 2 BASIC17.02■□□□□ 0.31
PCDHB11Q9Y5F2 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
PCDHB11Q9Y5F2 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
PCDHB11Q9Y5F2 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
PCDHB11Q9Y5F2 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
PCDHB11Q9Y5F2 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
PCDHB11Q9Y5F2 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PCDHB11Q9Y5F2 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC17.01■□□□□ 0.31
PCDHB11Q9Y5F2 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
PCDHB11Q9Y5F2 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PCDHB11Q9Y5F2 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC17.01■□□□□ 0.31
PCDHB11Q9Y5F2 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
PCDHB11Q9Y5F2 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
PCDHB11Q9Y5F2 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
PCDHB11Q9Y5F2 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
PCDHB11Q9Y5F2 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PCDHB11Q9Y5F2 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
PCDHB11Q9Y5F2 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC17.01■□□□□ 0.31
PCDHB11Q9Y5F2 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
PCDHB11Q9Y5F2 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC17.01■□□□□ 0.31
PCDHB11Q9Y5F2 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PCDHB11Q9Y5F2 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
PCDHB11Q9Y5F2 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
PCDHB11Q9Y5F2 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PCDHB11Q9Y5F2 INIP-202ENST00000374236 874 ntTSL 2 BASIC17.01■□□□□ 0.31
PCDHB11Q9Y5F2 AL591424.1-201ENST00000442569 1213 ntBASIC17.01■□□□□ 0.31
PCDHB11Q9Y5F2 IGHV3-52-201ENST00000519770 353 ntBASIC17.01■□□□□ 0.31
PCDHB11Q9Y5F2 OR7E14P-202ENST00000530490 1290 ntBASIC17.01■□□□□ 0.31
PCDHB11Q9Y5F2 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC17.01■□□□□ 0.31
PCDHB11Q9Y5F2 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC17.01■□□□□ 0.31
PCDHB11Q9Y5F2 AL139288.1-201ENST00000623748 933 ntBASIC17.01■□□□□ 0.31
PCDHB11Q9Y5F2 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
PCDHB11Q9Y5F2 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
PCDHB11Q9Y5F2 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC17.01■□□□□ 0.31
PCDHB11Q9Y5F2 AL356309.3-201ENST00000624132 1934 ntBASIC17.01■□□□□ 0.31
PCDHB11Q9Y5F2 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
PCDHB11Q9Y5F2 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC17.01■□□□□ 0.31
PCDHB11Q9Y5F2 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC17.01■□□□□ 0.31
PCDHB11Q9Y5F2 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
PCDHB11Q9Y5F2 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
PCDHB11Q9Y5F2 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
PCDHB11Q9Y5F2 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
PCDHB11Q9Y5F2 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
PCDHB11Q9Y5F2 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
PCDHB11Q9Y5F2 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC17■□□□□ 0.31
PCDHB11Q9Y5F2 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
PCDHB11Q9Y5F2 SOD2-201ENST00000337404 991 ntTSL 2 BASIC17■□□□□ 0.31
PCDHB11Q9Y5F2 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
PCDHB11Q9Y5F2 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
PCDHB11Q9Y5F2 RAB17-203ENST00000409576 466 ntTSL 3 BASIC17■□□□□ 0.31
PCDHB11Q9Y5F2 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC17■□□□□ 0.31
PCDHB11Q9Y5F2 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC17■□□□□ 0.31
PCDHB11Q9Y5F2 MED15P5-201ENST00000423150 992 ntBASIC17■□□□□ 0.31
PCDHB11Q9Y5F2 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC17■□□□□ 0.31
PCDHB11Q9Y5F2 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC17■□□□□ 0.31
PCDHB11Q9Y5F2 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC17■□□□□ 0.31
PCDHB11Q9Y5F2 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC17■□□□□ 0.31
PCDHB11Q9Y5F2 AC108860.2-201ENST00000562760 2183 ntBASIC17■□□□□ 0.31
PCDHB11Q9Y5F2 AC021087.4-201ENST00000563761 564 ntBASIC17■□□□□ 0.31
PCDHB11Q9Y5F2 LINC00304-203ENST00000565008 1864 ntBASIC17■□□□□ 0.31
PCDHB11Q9Y5F2 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
PCDHB11Q9Y5F2 FAM197Y3-203ENST00000618346 717 ntBASIC17■□□□□ 0.31
PCDHB11Q9Y5F2 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC17■□□□□ 0.31
PCDHB11Q9Y5F2 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC17■□□□□ 0.31
PCDHB11Q9Y5F2 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC17■□□□□ 0.31
PCDHB11Q9Y5F2 AC141586.5-201ENST00000624546 2050 ntBASIC17■□□□□ 0.31
PCDHB11Q9Y5F2 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
PCDHB11Q9Y5F2 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
PCDHB11Q9Y5F2 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC16.99■□□□□ 0.31
PCDHB11Q9Y5F2 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC16.99■□□□□ 0.31
PCDHB11Q9Y5F2 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC16.99■□□□□ 0.31
PCDHB11Q9Y5F2 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC16.99■□□□□ 0.31
PCDHB11Q9Y5F2 AL355312.1-201ENST00000407115 2176 ntBASIC16.99■□□□□ 0.31
PCDHB11Q9Y5F2 PRORSD1P-202ENST00000563365 2154 ntBASIC16.99■□□□□ 0.31
PCDHB11Q9Y5F2 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC16.99■□□□□ 0.31
PCDHB11Q9Y5F2 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC16.99■□□□□ 0.31
PCDHB11Q9Y5F2 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC16.99■□□□□ 0.31
PCDHB11Q9Y5F2 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
PCDHB11Q9Y5F2 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
PCDHB11Q9Y5F2 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
PCDHB11Q9Y5F2 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC16.99■□□□□ 0.31
PCDHB11Q9Y5F2 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
PCDHB11Q9Y5F2 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms