Protein–RNA interactions for Protein: Q9BT76

UPK3B, Uroplakin-3b, humanhuman

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3BQ9BT76 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC12.12□□□□□ -0.47
UPK3BQ9BT76 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC12.12□□□□□ -0.47
UPK3BQ9BT76 TLE1-202ENST00000376484 666 ntTSL 3 BASIC12.12□□□□□ -0.47
UPK3BQ9BT76 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
UPK3BQ9BT76 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC12.12□□□□□ -0.47
UPK3BQ9BT76 PON3-205ENST00000451904 1053 ntTSL 3 BASIC12.12□□□□□ -0.47
UPK3BQ9BT76 AC073648.2-201ENST00000510116 352 ntBASIC12.12□□□□□ -0.47
UPK3BQ9BT76 PENK-208ENST00000523051 772 ntTSL 5 BASIC12.12□□□□□ -0.47
UPK3BQ9BT76 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
UPK3BQ9BT76 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC12.12□□□□□ -0.47
UPK3BQ9BT76 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC12.12□□□□□ -0.47
UPK3BQ9BT76 MNT-208ENST00000575394 606 ntTSL 4 BASIC12.12□□□□□ -0.47
UPK3BQ9BT76 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC12.12□□□□□ -0.47
UPK3BQ9BT76 MTDHP3-201ENST00000594186 672 ntBASIC12.12□□□□□ -0.47
UPK3BQ9BT76 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
UPK3BQ9BT76 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC12.12□□□□□ -0.47
UPK3BQ9BT76 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC12.12□□□□□ -0.47
UPK3BQ9BT76 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
UPK3BQ9BT76 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
UPK3BQ9BT76 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
UPK3BQ9BT76 AC010460.3-201ENST00000511359 1579 ntBASIC12.12□□□□□ -0.47
UPK3BQ9BT76 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC12.12□□□□□ -0.47
UPK3BQ9BT76 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
UPK3BQ9BT76 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
UPK3BQ9BT76 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
UPK3BQ9BT76 EFTUD1P1-204ENST00000560401 1798 ntBASIC12.12□□□□□ -0.47
UPK3BQ9BT76 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
UPK3BQ9BT76 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
UPK3BQ9BT76 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC12.12□□□□□ -0.47
UPK3BQ9BT76 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
UPK3BQ9BT76 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
UPK3BQ9BT76 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
UPK3BQ9BT76 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC12.12□□□□□ -0.47
UPK3BQ9BT76 AL162727.3-201ENST00000635661 2787 ntBASIC12.12□□□□□ -0.47
UPK3BQ9BT76 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC12.11□□□□□ -0.47
UPK3BQ9BT76 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
UPK3BQ9BT76 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
UPK3BQ9BT76 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
UPK3BQ9BT76 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
UPK3BQ9BT76 COL5A1-208ENST00000618395 8437 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
UPK3BQ9BT76 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
UPK3BQ9BT76 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC12.11□□□□□ -0.47
UPK3BQ9BT76 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC12.11□□□□□ -0.47
UPK3BQ9BT76 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
UPK3BQ9BT76 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
UPK3BQ9BT76 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
UPK3BQ9BT76 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
UPK3BQ9BT76 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
UPK3BQ9BT76 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
UPK3BQ9BT76 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC12.11□□□□□ -0.47
UPK3BQ9BT76 AL596257.1-201ENST00000641463 2694 ntBASIC12.11□□□□□ -0.47
UPK3BQ9BT76 ANKHD1-202ENST00000297183 7606 ntTSL 5 BASIC12.11□□□□□ -0.47
UPK3BQ9BT76 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
UPK3BQ9BT76 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC12.11□□□□□ -0.47
UPK3BQ9BT76 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
UPK3BQ9BT76 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC12.11□□□□□ -0.47
UPK3BQ9BT76 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
UPK3BQ9BT76 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC12.11□□□□□ -0.47
UPK3BQ9BT76 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC12.11□□□□□ -0.47
UPK3BQ9BT76 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
UPK3BQ9BT76 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
UPK3BQ9BT76 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC12.11□□□□□ -0.47
UPK3BQ9BT76 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
UPK3BQ9BT76 FAM197Y8-203ENST00000450145 560 ntBASIC12.11□□□□□ -0.47
UPK3BQ9BT76 AC009078.2-202ENST00000463353 338 ntBASIC12.11□□□□□ -0.47
UPK3BQ9BT76 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC12.11□□□□□ -0.47
UPK3BQ9BT76 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
UPK3BQ9BT76 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC12.11□□□□□ -0.47
UPK3BQ9BT76 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC12.11□□□□□ -0.47
UPK3BQ9BT76 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC12.11□□□□□ -0.47
UPK3BQ9BT76 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC12.11□□□□□ -0.47
UPK3BQ9BT76 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
UPK3BQ9BT76 AL773604.1-201ENST00000617417 272 ntBASIC12.11□□□□□ -0.47
UPK3BQ9BT76 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC12.11□□□□□ -0.47
UPK3BQ9BT76 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC12.11□□□□□ -0.47
UPK3BQ9BT76 AD001527.2-201ENST00000622994 785 ntBASIC12.11□□□□□ -0.47
UPK3BQ9BT76 TP73-AS1-207ENST00000624167 988 ntBASIC12.11□□□□□ -0.47
UPK3BQ9BT76 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC12.11□□□□□ -0.47
UPK3BQ9BT76 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
UPK3BQ9BT76 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC12.11□□□□□ -0.47
UPK3BQ9BT76 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
UPK3BQ9BT76 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
UPK3BQ9BT76 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
UPK3BQ9BT76 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
UPK3BQ9BT76 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
UPK3BQ9BT76 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
UPK3BQ9BT76 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
UPK3BQ9BT76 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
UPK3BQ9BT76 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC12.11□□□□□ -0.47
UPK3BQ9BT76 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC12.11□□□□□ -0.47
UPK3BQ9BT76 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC12.11□□□□□ -0.47
UPK3BQ9BT76 GRM5-205ENST00000455756 7927 ntAPPRIS P3 TSL 2 BASIC12.11□□□□□ -0.47
UPK3BQ9BT76 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
UPK3BQ9BT76 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
UPK3BQ9BT76 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
UPK3BQ9BT76 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
UPK3BQ9BT76 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC12.11□□□□□ -0.47
UPK3BQ9BT76 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
UPK3BQ9BT76 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
UPK3BQ9BT76 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms