Protein–RNA interactions for Protein: Q99758

ABCA3, ATP-binding cassette sub-family A member 3, humanhuman

Predictions only

Length 1,704 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3Q99758 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
ABCA3Q99758 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
ABCA3Q99758 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC22.77■■□□□ 1.24
ABCA3Q99758 LINC00895-201ENST00000629028 1637 ntBASIC22.77■■□□□ 1.24
ABCA3Q99758 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC22.77■■□□□ 1.24
ABCA3Q99758 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.23
ABCA3Q99758 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC22.77■■□□□ 1.23
ABCA3Q99758 MPI-209ENST00000564003 1195 ntTSL 2 BASIC22.77■■□□□ 1.23
ABCA3Q99758 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
ABCA3Q99758 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC22.76■■□□□ 1.23
ABCA3Q99758 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC22.76■■□□□ 1.23
ABCA3Q99758 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC22.76■■□□□ 1.23
ABCA3Q99758 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
ABCA3Q99758 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC22.76■■□□□ 1.23
ABCA3Q99758 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC22.76■■□□□ 1.23
ABCA3Q99758 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC22.76■■□□□ 1.23
ABCA3Q99758 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
ABCA3Q99758 AC119751.2-201ENST00000504529 210 ntBASIC22.76■■□□□ 1.23
ABCA3Q99758 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC22.76■■□□□ 1.23
ABCA3Q99758 PRR29-204ENST00000577953 565 ntTSL 4 BASIC22.76■■□□□ 1.23
ABCA3Q99758 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
ABCA3Q99758 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC22.76■■□□□ 1.23
ABCA3Q99758 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC22.76■■□□□ 1.23
ABCA3Q99758 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC22.76■■□□□ 1.23
ABCA3Q99758 WIZP1-201ENST00000531444 2299 ntBASIC22.75■■□□□ 1.23
ABCA3Q99758 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC22.75■■□□□ 1.23
ABCA3Q99758 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC22.75■■□□□ 1.23
ABCA3Q99758 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC22.75■■□□□ 1.23
ABCA3Q99758 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
ABCA3Q99758 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC22.75■■□□□ 1.23
ABCA3Q99758 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC22.75■■□□□ 1.23
ABCA3Q99758 AC017083.2-201ENST00000608069 979 ntBASIC22.75■■□□□ 1.23
ABCA3Q99758 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC22.75■■□□□ 1.23
ABCA3Q99758 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC22.75■■□□□ 1.23
ABCA3Q99758 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
ABCA3Q99758 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
ABCA3Q99758 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC22.75■■□□□ 1.23
ABCA3Q99758 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC22.75■■□□□ 1.23
ABCA3Q99758 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC22.75■■□□□ 1.23
ABCA3Q99758 STK4-201ENST00000372801 2038 ntTSL 2 BASIC22.75■■□□□ 1.23
ABCA3Q99758 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC22.75■■□□□ 1.23
ABCA3Q99758 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC22.75■■□□□ 1.23
ABCA3Q99758 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC22.74■■□□□ 1.23
ABCA3Q99758 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
ABCA3Q99758 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC22.74■■□□□ 1.23
ABCA3Q99758 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
ABCA3Q99758 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC22.74■■□□□ 1.23
ABCA3Q99758 AC083973.1-206ENST00000518213 815 ntTSL 3 BASIC22.74■■□□□ 1.23
ABCA3Q99758 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC22.74■■□□□ 1.23
ABCA3Q99758 TP53TG3HP-202ENST00000569755 579 ntBASIC22.74■■□□□ 1.23
ABCA3Q99758 AC091167.2-201ENST00000579581 588 ntBASIC22.74■■□□□ 1.23
ABCA3Q99758 AC073389.1-201ENST00000595595 795 ntBASIC22.74■■□□□ 1.23
ABCA3Q99758 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC22.74■■□□□ 1.23
ABCA3Q99758 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC22.74■■□□□ 1.23
ABCA3Q99758 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
ABCA3Q99758 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC22.74■■□□□ 1.23
ABCA3Q99758 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC22.74■■□□□ 1.23
ABCA3Q99758 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC22.74■■□□□ 1.23
ABCA3Q99758 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
ABCA3Q99758 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC22.74■■□□□ 1.23
ABCA3Q99758 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC22.74■■□□□ 1.23
ABCA3Q99758 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC22.74■■□□□ 1.23
ABCA3Q99758 ASF1B-202ENST00000474890 765 ntTSL 2 BASIC22.74■■□□□ 1.23
ABCA3Q99758 SSH2-210ENST00000582084 560 ntTSL 3 BASIC22.74■■□□□ 1.23
ABCA3Q99758 GRAMD4P3-201ENST00000621665 1669 ntBASIC22.74■■□□□ 1.23
ABCA3Q99758 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
ABCA3Q99758 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
ABCA3Q99758 FLJ13224-201ENST00000313737 1514 ntBASIC22.73■■□□□ 1.23
ABCA3Q99758 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
ABCA3Q99758 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC22.73■■□□□ 1.23
ABCA3Q99758 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC22.73■■□□□ 1.23
ABCA3Q99758 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC22.73■■□□□ 1.23
ABCA3Q99758 RABEPK-201ENST00000259460 1313 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
ABCA3Q99758 AP3S2-216ENST00000617003 1561 ntBASIC22.73■■□□□ 1.23
ABCA3Q99758 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
ABCA3Q99758 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
ABCA3Q99758 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC22.73■■□□□ 1.23
ABCA3Q99758 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC22.73■■□□□ 1.23
ABCA3Q99758 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC22.73■■□□□ 1.23
ABCA3Q99758 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC22.73■■□□□ 1.23
ABCA3Q99758 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC22.73■■□□□ 1.23
ABCA3Q99758 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC22.73■■□□□ 1.23
ABCA3Q99758 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC22.72■■□□□ 1.23
ABCA3Q99758 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC22.72■■□□□ 1.23
ABCA3Q99758 LYSMD4-203ENST00000378904 2122 ntBASIC22.72■■□□□ 1.23
ABCA3Q99758 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC22.72■■□□□ 1.23
ABCA3Q99758 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
ABCA3Q99758 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC22.72■■□□□ 1.23
ABCA3Q99758 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC22.72■■□□□ 1.23
ABCA3Q99758 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC22.72■■□□□ 1.23
ABCA3Q99758 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC22.72■■□□□ 1.23
ABCA3Q99758 AL138918.1-201ENST00000568306 659 ntBASIC22.72■■□□□ 1.23
ABCA3Q99758 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
ABCA3Q99758 GPER1-207ENST00000619052 571 ntTSL 2 BASIC22.72■■□□□ 1.23
ABCA3Q99758 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
ABCA3Q99758 AC138969.3-201ENST00000546612 1459 ntBASIC22.72■■□□□ 1.23
ABCA3Q99758 AC138932.2-201ENST00000548268 1459 ntBASIC22.72■■□□□ 1.23
ABCA3Q99758 AC126755.4-201ENST00000549796 1459 ntBASIC22.72■■□□□ 1.23
ABCA3Q99758 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC22.72■■□□□ 1.23
ABCA3Q99758 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
Retrieved 100 of 98,524 protein–RNA pairs in 23.4 ms