Protein–RNA interactions for Protein: Q96T58

SPEN, Msx2-interacting protein, humanhuman

Known RBP Predictions only

Length 3,664 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPENQ96T58 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
SPENQ96T58 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC15.5■□□□□ 0.07
SPENQ96T58 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC15.49■□□□□ 0.07
SPENQ96T58 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
SPENQ96T58 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC15.49■□□□□ 0.07
SPENQ96T58 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
SPENQ96T58 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC15.49■□□□□ 0.07
SPENQ96T58 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
SPENQ96T58 SSH2-211ENST00000590153 570 ntTSL 4 BASIC15.49■□□□□ 0.07
SPENQ96T58 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
SPENQ96T58 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC15.49■□□□□ 0.07
SPENQ96T58 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
SPENQ96T58 TDG-209ENST00000544861 1387 ntTSL 2 BASIC15.49■□□□□ 0.07
SPENQ96T58 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
SPENQ96T58 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
SPENQ96T58 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC15.49■□□□□ 0.07
SPENQ96T58 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC15.49■□□□□ 0.07
SPENQ96T58 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
SPENQ96T58 TEX12-201ENST00000280358 1147 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
SPENQ96T58 PTPA-213ENST00000419582 952 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
SPENQ96T58 ARSEP1-201ENST00000420443 635 ntBASIC15.49■□□□□ 0.07
SPENQ96T58 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC15.49■□□□□ 0.07
SPENQ96T58 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC15.49■□□□□ 0.07
SPENQ96T58 DUTP2-201ENST00000519164 463 ntBASIC15.49■□□□□ 0.07
SPENQ96T58 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
SPENQ96T58 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
SPENQ96T58 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
SPENQ96T58 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
SPENQ96T58 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC15.49■□□□□ 0.07
SPENQ96T58 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC15.49■□□□□ 0.07
SPENQ96T58 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
SPENQ96T58 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
SPENQ96T58 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC15.49■□□□□ 0.07
SPENQ96T58 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC15.49■□□□□ 0.07
SPENQ96T58 NABP1-203ENST00000409510 843 ntTSL 5 BASIC15.49■□□□□ 0.07
SPENQ96T58 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC15.49■□□□□ 0.07
SPENQ96T58 AL158211.3-201ENST00000607385 239 ntBASIC15.49■□□□□ 0.07
SPENQ96T58 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
SPENQ96T58 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
SPENQ96T58 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC15.49■□□□□ 0.07
SPENQ96T58 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC15.49■□□□□ 0.07
SPENQ96T58 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
SPENQ96T58 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
SPENQ96T58 BASP1P1-201ENST00000430708 665 ntBASIC15.48■□□□□ 0.07
SPENQ96T58 AL357497.1-201ENST00000436249 666 ntTSL 3 BASIC15.48■□□□□ 0.07
SPENQ96T58 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC15.48■□□□□ 0.07
SPENQ96T58 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
SPENQ96T58 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC15.48■□□□□ 0.07
SPENQ96T58 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC15.48■□□□□ 0.07
SPENQ96T58 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
SPENQ96T58 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC15.48■□□□□ 0.07
SPENQ96T58 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC15.48■□□□□ 0.07
SPENQ96T58 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
SPENQ96T58 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
SPENQ96T58 U91328.1-201ENST00000437528 223 ntBASIC15.48■□□□□ 0.07
SPENQ96T58 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC15.48■□□□□ 0.07
SPENQ96T58 RAB3A-202ENST00000464076 1253 ntTSL 2 BASIC15.48■□□□□ 0.07
SPENQ96T58 SLC25A39P2-201ENST00000537614 270 ntBASIC15.48■□□□□ 0.07
SPENQ96T58 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
SPENQ96T58 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC15.48■□□□□ 0.07
SPENQ96T58 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.07
SPENQ96T58 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
SPENQ96T58 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
SPENQ96T58 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC15.48■□□□□ 0.07
SPENQ96T58 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
SPENQ96T58 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
SPENQ96T58 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
SPENQ96T58 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
SPENQ96T58 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
SPENQ96T58 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
SPENQ96T58 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
SPENQ96T58 AL596325.1-201ENST00000563991 1082 ntBASIC15.48■□□□□ 0.07
SPENQ96T58 TK1-204ENST00000590430 683 ntTSL 3 BASIC15.48■□□□□ 0.07
SPENQ96T58 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC15.48■□□□□ 0.07
SPENQ96T58 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
SPENQ96T58 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
SPENQ96T58 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC15.47■□□□□ 0.07
SPENQ96T58 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC15.47■□□□□ 0.07
SPENQ96T58 TOMM5-201ENST00000321301 751 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
SPENQ96T58 MRPL36-204ENST00000508987 686 ntAPPRIS P1 TSL 2 BASIC15.47■□□□□ 0.07
SPENQ96T58 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC15.47■□□□□ 0.07
SPENQ96T58 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC15.47■□□□□ 0.07
SPENQ96T58 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC15.47■□□□□ 0.07
SPENQ96T58 THTPA-204ENST00000554970 569 ntTSL 4 BASIC15.47■□□□□ 0.07
SPENQ96T58 THTPA-206ENST00000556015 535 ntTSL 3 BASIC15.47■□□□□ 0.07
SPENQ96T58 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC15.47■□□□□ 0.07
SPENQ96T58 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
SPENQ96T58 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
SPENQ96T58 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC15.47■□□□□ 0.07
SPENQ96T58 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
SPENQ96T58 FAM172A-206ENST00000509163 1369 ntTSL 2 BASIC15.47■□□□□ 0.07
SPENQ96T58 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC15.47■□□□□ 0.07
SPENQ96T58 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
SPENQ96T58 COX5BP8-201ENST00000416911 349 ntBASIC15.47■□□□□ 0.07
SPENQ96T58 GOLGA6L11P-201ENST00000417252 1298 ntBASIC15.47■□□□□ 0.07
SPENQ96T58 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC15.47■□□□□ 0.07
SPENQ96T58 AC067863.1-201ENST00000494933 530 ntBASIC15.47■□□□□ 0.07
SPENQ96T58 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
SPENQ96T58 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
SPENQ96T58 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC15.47■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 49 ms