Protein–RNA interactions for Protein: Q96II8

LRCH3, Leucine-rich repeat and calponin homology domain-containing protein 3, humanhuman

Predictions only

Length 777 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3Q96II8 SPCS2P4-201ENST00000436160 681 ntBASIC18.69■□□□□ 0.58
LRCH3Q96II8 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
LRCH3Q96II8 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC18.69■□□□□ 0.58
LRCH3Q96II8 TMPRSS11CP-201ENST00000453277 683 ntBASIC18.69■□□□□ 0.58
LRCH3Q96II8 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC18.69■□□□□ 0.58
LRCH3Q96II8 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
LRCH3Q96II8 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC18.69■□□□□ 0.58
LRCH3Q96II8 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC18.69■□□□□ 0.58
LRCH3Q96II8 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC18.69■□□□□ 0.58
LRCH3Q96II8 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
LRCH3Q96II8 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC18.69■□□□□ 0.58
LRCH3Q96II8 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
LRCH3Q96II8 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
LRCH3Q96II8 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
LRCH3Q96II8 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
LRCH3Q96II8 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC18.69■□□□□ 0.58
LRCH3Q96II8 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC18.69■□□□□ 0.58
LRCH3Q96II8 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
LRCH3Q96II8 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC18.68■□□□□ 0.58
LRCH3Q96II8 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
LRCH3Q96II8 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
LRCH3Q96II8 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
LRCH3Q96II8 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC18.68■□□□□ 0.58
LRCH3Q96II8 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC18.68■□□□□ 0.58
LRCH3Q96II8 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
LRCH3Q96II8 HCG4-201ENST00000418983 998 ntBASIC18.68■□□□□ 0.58
LRCH3Q96II8 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC18.68■□□□□ 0.58
LRCH3Q96II8 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC18.68■□□□□ 0.58
LRCH3Q96II8 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
LRCH3Q96II8 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC18.68■□□□□ 0.58
LRCH3Q96II8 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
LRCH3Q96II8 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC18.68■□□□□ 0.58
LRCH3Q96II8 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC18.68■□□□□ 0.58
LRCH3Q96II8 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC18.68■□□□□ 0.58
LRCH3Q96II8 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC18.68■□□□□ 0.58
LRCH3Q96II8 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
LRCH3Q96II8 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
LRCH3Q96II8 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
LRCH3Q96II8 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
LRCH3Q96II8 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC18.68■□□□□ 0.58
LRCH3Q96II8 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
LRCH3Q96II8 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC18.68■□□□□ 0.58
LRCH3Q96II8 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC18.68■□□□□ 0.58
LRCH3Q96II8 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC18.68■□□□□ 0.58
LRCH3Q96II8 AL161938.1-201ENST00000569833 2180 ntBASIC18.68■□□□□ 0.58
LRCH3Q96II8 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
LRCH3Q96II8 AL049757.1-201ENST00000616842 1596 ntBASIC18.68■□□□□ 0.58
LRCH3Q96II8 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
LRCH3Q96II8 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
LRCH3Q96II8 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
LRCH3Q96II8 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
LRCH3Q96II8 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC18.67■□□□□ 0.58
LRCH3Q96II8 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC18.67■□□□□ 0.58
LRCH3Q96II8 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
LRCH3Q96II8 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
LRCH3Q96II8 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
LRCH3Q96II8 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
LRCH3Q96II8 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
LRCH3Q96II8 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC18.67■□□□□ 0.58
LRCH3Q96II8 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
LRCH3Q96II8 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC18.67■□□□□ 0.58
LRCH3Q96II8 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC18.67■□□□□ 0.58
LRCH3Q96II8 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC18.67■□□□□ 0.58
LRCH3Q96II8 CD63-208ENST00000549117 1233 ntAPPRIS P1 TSL 3 BASIC18.67■□□□□ 0.58
LRCH3Q96II8 IL32-232ENST00000552356 623 ntAPPRIS ALT2 TSL 3 BASIC18.67■□□□□ 0.58
LRCH3Q96II8 AC046168.2-201ENST00000560590 875 ntTSL 3 BASIC18.67■□□□□ 0.58
LRCH3Q96II8 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC18.67■□□□□ 0.58
LRCH3Q96II8 AC097637.2-201ENST00000624096 1997 ntBASIC18.67■□□□□ 0.58
LRCH3Q96II8 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
LRCH3Q96II8 UXT-AS1-201ENST00000590504 1525 ntBASIC18.67■□□□□ 0.58
LRCH3Q96II8 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
LRCH3Q96II8 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC18.67■□□□□ 0.58
LRCH3Q96II8 AC026471.1-201ENST00000564629 3026 ntBASIC18.67■□□□□ 0.58
LRCH3Q96II8 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
LRCH3Q96II8 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
LRCH3Q96II8 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
LRCH3Q96II8 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
LRCH3Q96II8 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC18.67■□□□□ 0.58
LRCH3Q96II8 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC18.67■□□□□ 0.58
LRCH3Q96II8 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
LRCH3Q96II8 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
LRCH3Q96II8 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC18.66■□□□□ 0.58
LRCH3Q96II8 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC18.66■□□□□ 0.58
LRCH3Q96II8 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
LRCH3Q96II8 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
LRCH3Q96II8 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC18.66■□□□□ 0.58
LRCH3Q96II8 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC18.66■□□□□ 0.58
LRCH3Q96II8 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
LRCH3Q96II8 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
LRCH3Q96II8 LINC01205-202ENST00000497996 1493 ntTSL 2 BASIC18.66■□□□□ 0.58
LRCH3Q96II8 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
LRCH3Q96II8 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
LRCH3Q96II8 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
LRCH3Q96II8 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC18.66■□□□□ 0.58
LRCH3Q96II8 POLR2I-201ENST00000221859 913 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
LRCH3Q96II8 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
LRCH3Q96II8 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
LRCH3Q96II8 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
LRCH3Q96II8 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
LRCH3Q96II8 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC18.66■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 78.6 ms