Protein–RNA interactions for Protein: Q96DI7

SNRNP40, U5 small nuclear ribonucleoprotein 40 kDa protein, humanhuman

Known RBP Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40Q96DI7 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
SNRNP40Q96DI7 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
SNRNP40Q96DI7 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
SNRNP40Q96DI7 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
SNRNP40Q96DI7 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
SNRNP40Q96DI7 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC15.53■□□□□ 0.08
SNRNP40Q96DI7 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC15.53■□□□□ 0.08
SNRNP40Q96DI7 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
SNRNP40Q96DI7 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
SNRNP40Q96DI7 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
SNRNP40Q96DI7 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC15.53■□□□□ 0.08
SNRNP40Q96DI7 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
SNRNP40Q96DI7 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC15.53■□□□□ 0.08
SNRNP40Q96DI7 AC129492.6-201ENST00000611383 1305 ntBASIC15.53■□□□□ 0.08
SNRNP40Q96DI7 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC15.53■□□□□ 0.08
SNRNP40Q96DI7 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
SNRNP40Q96DI7 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
SNRNP40Q96DI7 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
SNRNP40Q96DI7 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
SNRNP40Q96DI7 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC15.53■□□□□ 0.08
SNRNP40Q96DI7 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
SNRNP40Q96DI7 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC15.53■□□□□ 0.08
SNRNP40Q96DI7 INGX-202ENST00000489074 768 ntBASIC15.53■□□□□ 0.08
SNRNP40Q96DI7 SLC25A6P2-201ENST00000497974 877 ntBASIC15.53■□□□□ 0.08
SNRNP40Q96DI7 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC15.53■□□□□ 0.08
SNRNP40Q96DI7 VPS29-207ENST00000549970 818 ntTSL 3 BASIC15.53■□□□□ 0.08
SNRNP40Q96DI7 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC15.53■□□□□ 0.08
SNRNP40Q96DI7 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC15.53■□□□□ 0.08
SNRNP40Q96DI7 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC15.53■□□□□ 0.08
SNRNP40Q96DI7 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC15.53■□□□□ 0.08
SNRNP40Q96DI7 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC15.53■□□□□ 0.08
SNRNP40Q96DI7 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
SNRNP40Q96DI7 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
SNRNP40Q96DI7 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
SNRNP40Q96DI7 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
SNRNP40Q96DI7 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
SNRNP40Q96DI7 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
SNRNP40Q96DI7 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
SNRNP40Q96DI7 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC15.53■□□□□ 0.08
SNRNP40Q96DI7 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
SNRNP40Q96DI7 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
SNRNP40Q96DI7 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
SNRNP40Q96DI7 CYP51A1P2-201ENST00000419457 1499 ntBASIC15.52■□□□□ 0.08
SNRNP40Q96DI7 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC15.52■□□□□ 0.08
SNRNP40Q96DI7 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC15.52■□□□□ 0.08
SNRNP40Q96DI7 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
SNRNP40Q96DI7 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
SNRNP40Q96DI7 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
SNRNP40Q96DI7 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
SNRNP40Q96DI7 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.08
SNRNP40Q96DI7 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC15.52■□□□□ 0.08
SNRNP40Q96DI7 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC15.52■□□□□ 0.08
SNRNP40Q96DI7 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC15.52■□□□□ 0.08
SNRNP40Q96DI7 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
SNRNP40Q96DI7 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
SNRNP40Q96DI7 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
SNRNP40Q96DI7 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC15.52■□□□□ 0.08
SNRNP40Q96DI7 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
SNRNP40Q96DI7 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.08
SNRNP40Q96DI7 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
SNRNP40Q96DI7 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC15.52■□□□□ 0.08
SNRNP40Q96DI7 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC15.52■□□□□ 0.08
SNRNP40Q96DI7 AL592309.1-201ENST00000443127 649 ntBASIC15.52■□□□□ 0.08
SNRNP40Q96DI7 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
SNRNP40Q96DI7 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC15.52■□□□□ 0.08
SNRNP40Q96DI7 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC15.52■□□□□ 0.08
SNRNP40Q96DI7 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC15.52■□□□□ 0.08
SNRNP40Q96DI7 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC15.52■□□□□ 0.08
SNRNP40Q96DI7 AC099522.2-201ENST00000607001 744 ntBASIC15.52■□□□□ 0.08
SNRNP40Q96DI7 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC15.52■□□□□ 0.08
SNRNP40Q96DI7 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.08
SNRNP40Q96DI7 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
SNRNP40Q96DI7 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
SNRNP40Q96DI7 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC15.52■□□□□ 0.07
SNRNP40Q96DI7 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC15.52■□□□□ 0.07
SNRNP40Q96DI7 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC15.52■□□□□ 0.07
SNRNP40Q96DI7 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC15.52■□□□□ 0.07
SNRNP40Q96DI7 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC15.52■□□□□ 0.07
SNRNP40Q96DI7 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC15.52■□□□□ 0.07
SNRNP40Q96DI7 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC15.52■□□□□ 0.07
SNRNP40Q96DI7 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.07
SNRNP40Q96DI7 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC15.52■□□□□ 0.07
SNRNP40Q96DI7 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC15.52■□□□□ 0.07
SNRNP40Q96DI7 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
SNRNP40Q96DI7 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
SNRNP40Q96DI7 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC15.52■□□□□ 0.07
SNRNP40Q96DI7 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
SNRNP40Q96DI7 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
SNRNP40Q96DI7 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC15.51■□□□□ 0.07
SNRNP40Q96DI7 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
SNRNP40Q96DI7 AL135999.2-201ENST00000622438 1686 ntBASIC15.51■□□□□ 0.07
SNRNP40Q96DI7 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC15.51■□□□□ 0.07
SNRNP40Q96DI7 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
SNRNP40Q96DI7 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC15.51■□□□□ 0.07
SNRNP40Q96DI7 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC15.51■□□□□ 0.07
SNRNP40Q96DI7 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC15.51■□□□□ 0.07
SNRNP40Q96DI7 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
SNRNP40Q96DI7 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC15.51■□□□□ 0.07
SNRNP40Q96DI7 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
SNRNP40Q96DI7 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms