Protein–RNA interactions for Protein: Q8NF37

LPCAT1, Lysophosphatidylcholine acyltransferase 1, humanhuman

Predictions only

Length 534 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT1Q8NF37 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.4
LPCAT1Q8NF37 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
LPCAT1Q8NF37 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
LPCAT1Q8NF37 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC17.52■□□□□ 0.4
LPCAT1Q8NF37 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
LPCAT1Q8NF37 SCARNA2-201ENST00000458748 420 ntBASIC17.52■□□□□ 0.4
LPCAT1Q8NF37 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC17.52■□□□□ 0.4
LPCAT1Q8NF37 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
LPCAT1Q8NF37 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC17.52■□□□□ 0.4
LPCAT1Q8NF37 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC17.52■□□□□ 0.4
LPCAT1Q8NF37 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
LPCAT1Q8NF37 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC17.52■□□□□ 0.39
LPCAT1Q8NF37 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
LPCAT1Q8NF37 AL135999.2-201ENST00000622438 1686 ntBASIC17.52■□□□□ 0.39
LPCAT1Q8NF37 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC17.51■□□□□ 0.39
LPCAT1Q8NF37 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
LPCAT1Q8NF37 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
LPCAT1Q8NF37 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
LPCAT1Q8NF37 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
LPCAT1Q8NF37 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
LPCAT1Q8NF37 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
LPCAT1Q8NF37 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
LPCAT1Q8NF37 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
LPCAT1Q8NF37 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC17.51■□□□□ 0.39
LPCAT1Q8NF37 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
LPCAT1Q8NF37 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
LPCAT1Q8NF37 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
LPCAT1Q8NF37 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
LPCAT1Q8NF37 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC17.51■□□□□ 0.39
LPCAT1Q8NF37 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC17.51■□□□□ 0.39
LPCAT1Q8NF37 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC17.51■□□□□ 0.39
LPCAT1Q8NF37 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
LPCAT1Q8NF37 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
LPCAT1Q8NF37 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
LPCAT1Q8NF37 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
LPCAT1Q8NF37 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
LPCAT1Q8NF37 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
LPCAT1Q8NF37 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
LPCAT1Q8NF37 AC079781.3-201ENST00000449110 356 ntBASIC17.51■□□□□ 0.39
LPCAT1Q8NF37 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
LPCAT1Q8NF37 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
LPCAT1Q8NF37 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
LPCAT1Q8NF37 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC17.51■□□□□ 0.39
LPCAT1Q8NF37 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC17.51■□□□□ 0.39
LPCAT1Q8NF37 AL121912.1-201ENST00000603683 238 ntBASIC17.51■□□□□ 0.39
LPCAT1Q8NF37 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
LPCAT1Q8NF37 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
LPCAT1Q8NF37 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC17.51■□□□□ 0.39
LPCAT1Q8NF37 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC17.51■□□□□ 0.39
LPCAT1Q8NF37 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
LPCAT1Q8NF37 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
LPCAT1Q8NF37 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
LPCAT1Q8NF37 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC17.5■□□□□ 0.39
LPCAT1Q8NF37 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
LPCAT1Q8NF37 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
LPCAT1Q8NF37 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC17.5■□□□□ 0.39
LPCAT1Q8NF37 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
LPCAT1Q8NF37 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
LPCAT1Q8NF37 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC17.5■□□□□ 0.39
LPCAT1Q8NF37 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
LPCAT1Q8NF37 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
LPCAT1Q8NF37 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC17.5■□□□□ 0.39
LPCAT1Q8NF37 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
LPCAT1Q8NF37 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
LPCAT1Q8NF37 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC17.5■□□□□ 0.39
LPCAT1Q8NF37 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
LPCAT1Q8NF37 HIST2H3DP1-201ENST00000401004 416 ntBASIC17.5■□□□□ 0.39
LPCAT1Q8NF37 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
LPCAT1Q8NF37 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
LPCAT1Q8NF37 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC17.5■□□□□ 0.39
LPCAT1Q8NF37 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC17.5■□□□□ 0.39
LPCAT1Q8NF37 S100A2-206ENST00000497140 697 ntTSL 2 BASIC17.5■□□□□ 0.39
LPCAT1Q8NF37 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC17.5■□□□□ 0.39
LPCAT1Q8NF37 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC17.5■□□□□ 0.39
LPCAT1Q8NF37 CYB561-217ENST00000582997 877 ntTSL 5 BASIC17.5■□□□□ 0.39
LPCAT1Q8NF37 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC17.5■□□□□ 0.39
LPCAT1Q8NF37 AL031008.1-201ENST00000619963 541 ntBASIC17.5■□□□□ 0.39
LPCAT1Q8NF37 TP73-AS1-207ENST00000624167 988 ntBASIC17.5■□□□□ 0.39
LPCAT1Q8NF37 AL022326.1-202ENST00000641533 845 ntBASIC17.5■□□□□ 0.39
LPCAT1Q8NF37 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
LPCAT1Q8NF37 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
LPCAT1Q8NF37 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC17.5■□□□□ 0.39
LPCAT1Q8NF37 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
LPCAT1Q8NF37 WAC-202ENST00000347934 2839 ntTSL 5 BASIC17.5■□□□□ 0.39
LPCAT1Q8NF37 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC17.5■□□□□ 0.39
LPCAT1Q8NF37 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC17.5■□□□□ 0.39
LPCAT1Q8NF37 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
LPCAT1Q8NF37 AL023806.1-201ENST00000603994 1649 ntBASIC17.5■□□□□ 0.39
LPCAT1Q8NF37 BANP-227ENST00000626016 2144 ntTSL 2 BASIC17.5■□□□□ 0.39
LPCAT1Q8NF37 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
LPCAT1Q8NF37 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC17.5■□□□□ 0.39
LPCAT1Q8NF37 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
LPCAT1Q8NF37 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
LPCAT1Q8NF37 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
LPCAT1Q8NF37 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
LPCAT1Q8NF37 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
LPCAT1Q8NF37 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC17.49■□□□□ 0.39
LPCAT1Q8NF37 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
LPCAT1Q8NF37 AC016396.2-201ENST00000562575 1417 ntBASIC17.49■□□□□ 0.39
LPCAT1Q8NF37 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 24.6 ms