Protein–RNA interactions for Protein: Q71DI3

HIST2H3A, Histone H3.2, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST2H3AQ71DI3 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC15.27■□□□□ 0.04
HIST2H3AQ71DI3 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
HIST2H3AQ71DI3 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
HIST2H3AQ71DI3 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC15.27■□□□□ 0.04
HIST2H3AQ71DI3 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
HIST2H3AQ71DI3 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
HIST2H3AQ71DI3 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC15.27■□□□□ 0.04
HIST2H3AQ71DI3 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
HIST2H3AQ71DI3 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
HIST2H3AQ71DI3 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC15.27■□□□□ 0.04
HIST2H3AQ71DI3 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
HIST2H3AQ71DI3 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
HIST2H3AQ71DI3 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
HIST2H3AQ71DI3 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
HIST2H3AQ71DI3 POM121L3P-201ENST00000419331 1163 ntBASIC15.27■□□□□ 0.04
HIST2H3AQ71DI3 LINC00265-3P-201ENST00000447588 903 ntBASIC15.27■□□□□ 0.04
HIST2H3AQ71DI3 MINOS1P3-201ENST00000457048 203 ntBASIC15.27■□□□□ 0.04
HIST2H3AQ71DI3 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC15.27■□□□□ 0.04
HIST2H3AQ71DI3 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC15.27■□□□□ 0.04
HIST2H3AQ71DI3 AC092329.2-201ENST00000598402 547 ntBASIC15.27■□□□□ 0.04
HIST2H3AQ71DI3 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
HIST2H3AQ71DI3 AC010331.1-201ENST00000611423 582 ntBASIC15.27■□□□□ 0.04
HIST2H3AQ71DI3 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
HIST2H3AQ71DI3 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC15.27■□□□□ 0.03
HIST2H3AQ71DI3 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC15.27■□□□□ 0.03
HIST2H3AQ71DI3 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
HIST2H3AQ71DI3 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
HIST2H3AQ71DI3 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
HIST2H3AQ71DI3 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC15.27■□□□□ 0.03
HIST2H3AQ71DI3 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC15.27■□□□□ 0.03
HIST2H3AQ71DI3 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC15.27■□□□□ 0.03
HIST2H3AQ71DI3 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
HIST2H3AQ71DI3 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
HIST2H3AQ71DI3 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
HIST2H3AQ71DI3 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
HIST2H3AQ71DI3 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
HIST2H3AQ71DI3 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
HIST2H3AQ71DI3 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
HIST2H3AQ71DI3 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
HIST2H3AQ71DI3 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
HIST2H3AQ71DI3 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
HIST2H3AQ71DI3 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC15.26■□□□□ 0.03
HIST2H3AQ71DI3 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
HIST2H3AQ71DI3 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
HIST2H3AQ71DI3 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
HIST2H3AQ71DI3 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
HIST2H3AQ71DI3 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC15.26■□□□□ 0.03
HIST2H3AQ71DI3 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC15.26■□□□□ 0.03
HIST2H3AQ71DI3 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC15.26■□□□□ 0.03
HIST2H3AQ71DI3 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
HIST2H3AQ71DI3 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
HIST2H3AQ71DI3 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC15.26■□□□□ 0.03
HIST2H3AQ71DI3 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC15.26■□□□□ 0.03
HIST2H3AQ71DI3 ARMC10P1-201ENST00000313754 855 ntBASIC15.26■□□□□ 0.03
HIST2H3AQ71DI3 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC15.26■□□□□ 0.03
HIST2H3AQ71DI3 RCN1P2-201ENST00000398357 915 ntBASIC15.26■□□□□ 0.03
HIST2H3AQ71DI3 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
HIST2H3AQ71DI3 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC15.26■□□□□ 0.03
HIST2H3AQ71DI3 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
HIST2H3AQ71DI3 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC15.26■□□□□ 0.03
HIST2H3AQ71DI3 BET1L-206ENST00000486280 665 ntTSL 3 BASIC15.26■□□□□ 0.03
HIST2H3AQ71DI3 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
HIST2H3AQ71DI3 AC012615.1-201ENST00000565797 1299 ntBASIC15.26■□□□□ 0.03
HIST2H3AQ71DI3 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC15.26■□□□□ 0.03
HIST2H3AQ71DI3 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC15.26■□□□□ 0.03
HIST2H3AQ71DI3 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC15.26■□□□□ 0.03
HIST2H3AQ71DI3 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC15.26■□□□□ 0.03
HIST2H3AQ71DI3 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC15.26■□□□□ 0.03
HIST2H3AQ71DI3 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
HIST2H3AQ71DI3 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
HIST2H3AQ71DI3 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
HIST2H3AQ71DI3 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC15.26■□□□□ 0.03
HIST2H3AQ71DI3 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
HIST2H3AQ71DI3 AC132938.5-201ENST00000624980 1813 ntBASIC15.26■□□□□ 0.03
HIST2H3AQ71DI3 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC15.26■□□□□ 0.03
HIST2H3AQ71DI3 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
HIST2H3AQ71DI3 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
HIST2H3AQ71DI3 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
HIST2H3AQ71DI3 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
HIST2H3AQ71DI3 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
HIST2H3AQ71DI3 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC15.25■□□□□ 0.03
HIST2H3AQ71DI3 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC15.25■□□□□ 0.03
HIST2H3AQ71DI3 RHBDF1P1-201ENST00000427504 1941 ntBASIC15.25■□□□□ 0.03
HIST2H3AQ71DI3 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
HIST2H3AQ71DI3 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
HIST2H3AQ71DI3 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
HIST2H3AQ71DI3 AC009336.1-201ENST00000608941 1553 ntBASIC15.25■□□□□ 0.03
HIST2H3AQ71DI3 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
HIST2H3AQ71DI3 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC15.25■□□□□ 0.03
HIST2H3AQ71DI3 AC003669.1-201ENST00000334569 611 ntBASIC15.25■□□□□ 0.03
HIST2H3AQ71DI3 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
HIST2H3AQ71DI3 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC15.25■□□□□ 0.03
HIST2H3AQ71DI3 MIR1224-201ENST00000408193 85 ntBASIC15.25■□□□□ 0.03
HIST2H3AQ71DI3 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC15.25■□□□□ 0.03
HIST2H3AQ71DI3 RNF146-204ENST00000476956 884 ntTSL 2 BASIC15.25■□□□□ 0.03
HIST2H3AQ71DI3 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
HIST2H3AQ71DI3 AC074051.2-201ENST00000565115 352 ntBASIC15.25■□□□□ 0.03
HIST2H3AQ71DI3 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC15.25■□□□□ 0.03
HIST2H3AQ71DI3 AC114341.1-201ENST00000618070 349 ntBASIC15.25■□□□□ 0.03
HIST2H3AQ71DI3 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC15.25■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms