Protein–RNA interactions for Protein: Q6VVB1

NHLRC1, E3 ubiquitin-protein ligase NHLRC1, humanhuman

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC1Q6VVB1 UPK3BP1-201ENST00000428678 509 ntBASIC15.62■□□□□ 0.09
NHLRC1Q6VVB1 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
NHLRC1Q6VVB1 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC15.62■□□□□ 0.09
NHLRC1Q6VVB1 AP000867.3-201ENST00000524675 377 ntBASIC15.62■□□□□ 0.09
NHLRC1Q6VVB1 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC15.62■□□□□ 0.09
NHLRC1Q6VVB1 AC074051.2-201ENST00000565115 352 ntBASIC15.62■□□□□ 0.09
NHLRC1Q6VVB1 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC15.62■□□□□ 0.09
NHLRC1Q6VVB1 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC15.62■□□□□ 0.09
NHLRC1Q6VVB1 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC15.62■□□□□ 0.09
NHLRC1Q6VVB1 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC15.62■□□□□ 0.09
NHLRC1Q6VVB1 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC15.62■□□□□ 0.09
NHLRC1Q6VVB1 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
NHLRC1Q6VVB1 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
NHLRC1Q6VVB1 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
NHLRC1Q6VVB1 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC15.62■□□□□ 0.09
NHLRC1Q6VVB1 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
NHLRC1Q6VVB1 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
NHLRC1Q6VVB1 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
NHLRC1Q6VVB1 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC15.62■□□□□ 0.09
NHLRC1Q6VVB1 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC15.62■□□□□ 0.09
NHLRC1Q6VVB1 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
NHLRC1Q6VVB1 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
NHLRC1Q6VVB1 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
NHLRC1Q6VVB1 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
NHLRC1Q6VVB1 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
NHLRC1Q6VVB1 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
NHLRC1Q6VVB1 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC15.61■□□□□ 0.09
NHLRC1Q6VVB1 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
NHLRC1Q6VVB1 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
NHLRC1Q6VVB1 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC15.61■□□□□ 0.09
NHLRC1Q6VVB1 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC15.61■□□□□ 0.09
NHLRC1Q6VVB1 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
NHLRC1Q6VVB1 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC15.61■□□□□ 0.09
NHLRC1Q6VVB1 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
NHLRC1Q6VVB1 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
NHLRC1Q6VVB1 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
NHLRC1Q6VVB1 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC15.61■□□□□ 0.09
NHLRC1Q6VVB1 UBALD1-205ENST00000590891 2641 ntBASIC15.61■□□□□ 0.09
NHLRC1Q6VVB1 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC15.61■□□□□ 0.09
NHLRC1Q6VVB1 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC15.61■□□□□ 0.09
NHLRC1Q6VVB1 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
NHLRC1Q6VVB1 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
NHLRC1Q6VVB1 MYCLP1-201ENST00000372451 1075 ntBASIC15.61■□□□□ 0.09
NHLRC1Q6VVB1 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC15.61■□□□□ 0.09
NHLRC1Q6VVB1 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
NHLRC1Q6VVB1 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
NHLRC1Q6VVB1 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
NHLRC1Q6VVB1 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC15.61■□□□□ 0.09
NHLRC1Q6VVB1 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC15.61■□□□□ 0.09
NHLRC1Q6VVB1 AC114341.1-201ENST00000618070 349 ntBASIC15.61■□□□□ 0.09
NHLRC1Q6VVB1 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC15.61■□□□□ 0.09
NHLRC1Q6VVB1 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC15.61■□□□□ 0.09
NHLRC1Q6VVB1 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
NHLRC1Q6VVB1 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC15.61■□□□□ 0.09
NHLRC1Q6VVB1 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC15.61■□□□□ 0.09
NHLRC1Q6VVB1 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
NHLRC1Q6VVB1 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
NHLRC1Q6VVB1 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
NHLRC1Q6VVB1 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
NHLRC1Q6VVB1 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
NHLRC1Q6VVB1 AC132938.5-201ENST00000624980 1813 ntBASIC15.61■□□□□ 0.09
NHLRC1Q6VVB1 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
NHLRC1Q6VVB1 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC15.61■□□□□ 0.09
NHLRC1Q6VVB1 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
NHLRC1Q6VVB1 AL023806.1-201ENST00000603994 1649 ntBASIC15.61■□□□□ 0.09
NHLRC1Q6VVB1 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC15.6■□□□□ 0.09
NHLRC1Q6VVB1 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC15.6■□□□□ 0.09
NHLRC1Q6VVB1 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
NHLRC1Q6VVB1 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC15.6■□□□□ 0.09
NHLRC1Q6VVB1 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
NHLRC1Q6VVB1 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
NHLRC1Q6VVB1 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC15.6■□□□□ 0.09
NHLRC1Q6VVB1 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC15.6■□□□□ 0.09
NHLRC1Q6VVB1 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
NHLRC1Q6VVB1 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
NHLRC1Q6VVB1 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
NHLRC1Q6VVB1 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
NHLRC1Q6VVB1 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
NHLRC1Q6VVB1 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
NHLRC1Q6VVB1 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC15.6■□□□□ 0.09
NHLRC1Q6VVB1 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
NHLRC1Q6VVB1 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC15.6■□□□□ 0.09
NHLRC1Q6VVB1 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
NHLRC1Q6VVB1 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC15.6■□□□□ 0.09
NHLRC1Q6VVB1 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
NHLRC1Q6VVB1 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC15.6■□□□□ 0.09
NHLRC1Q6VVB1 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
NHLRC1Q6VVB1 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
NHLRC1Q6VVB1 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
NHLRC1Q6VVB1 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC15.6■□□□□ 0.09
NHLRC1Q6VVB1 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC15.6■□□□□ 0.09
NHLRC1Q6VVB1 MINOS1P3-201ENST00000457048 203 ntBASIC15.6■□□□□ 0.09
NHLRC1Q6VVB1 AC104819.1-201ENST00000504587 486 ntBASIC15.6■□□□□ 0.09
NHLRC1Q6VVB1 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC15.6■□□□□ 0.09
NHLRC1Q6VVB1 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC15.6■□□□□ 0.09
NHLRC1Q6VVB1 MIR5100-201ENST00000579544 119 ntBASIC15.6■□□□□ 0.09
NHLRC1Q6VVB1 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
NHLRC1Q6VVB1 AP000867.4-201ENST00000641616 219 ntBASIC15.6■□□□□ 0.09
NHLRC1Q6VVB1 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
NHLRC1Q6VVB1 PMPCAP1-201ENST00000508114 1576 ntBASIC15.6■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms