Protein–RNA interactions for Protein: P78413

IRX4, Iroquois-class homeodomain protein IRX-4, humanhuman

Predictions only

Length 519 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IRX4P78413 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC18.1■□□□□ 0.49
IRX4P78413 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
IRX4P78413 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
IRX4P78413 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
IRX4P78413 AC141586.5-201ENST00000624546 2050 ntBASIC18.1■□□□□ 0.49
IRX4P78413 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
IRX4P78413 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
IRX4P78413 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC18.09■□□□□ 0.49
IRX4P78413 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC18.09■□□□□ 0.49
IRX4P78413 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
IRX4P78413 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC18.09■□□□□ 0.49
IRX4P78413 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
IRX4P78413 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
IRX4P78413 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
IRX4P78413 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
IRX4P78413 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
IRX4P78413 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
IRX4P78413 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC18.09■□□□□ 0.49
IRX4P78413 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
IRX4P78413 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC18.09■□□□□ 0.49
IRX4P78413 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
IRX4P78413 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
IRX4P78413 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC18.09■□□□□ 0.49
IRX4P78413 AC005104.2-201ENST00000427818 678 ntBASIC18.09■□□□□ 0.49
IRX4P78413 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC18.09■□□□□ 0.49
IRX4P78413 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
IRX4P78413 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC18.09■□□□□ 0.49
IRX4P78413 MIR7706-201ENST00000613747 67 ntBASIC18.09■□□□□ 0.49
IRX4P78413 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC18.09■□□□□ 0.49
IRX4P78413 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC18.09■□□□□ 0.49
IRX4P78413 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
IRX4P78413 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC18.09■□□□□ 0.49
IRX4P78413 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
IRX4P78413 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC18.09■□□□□ 0.49
IRX4P78413 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
IRX4P78413 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
IRX4P78413 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
IRX4P78413 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC18.09■□□□□ 0.49
IRX4P78413 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
IRX4P78413 AL163051.1-201ENST00000569214 1512 ntBASIC18.08■□□□□ 0.49
IRX4P78413 AC009102.3-201ENST00000623118 1491 ntBASIC18.08■□□□□ 0.49
IRX4P78413 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
IRX4P78413 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
IRX4P78413 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC18.08■□□□□ 0.49
IRX4P78413 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
IRX4P78413 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
IRX4P78413 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
IRX4P78413 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
IRX4P78413 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.49
IRX4P78413 THAP5-204ENST00000438865 868 ntTSL 2 BASIC18.08■□□□□ 0.48
IRX4P78413 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.48
IRX4P78413 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
IRX4P78413 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC18.08■□□□□ 0.48
IRX4P78413 MNT-208ENST00000575394 606 ntTSL 4 BASIC18.08■□□□□ 0.48
IRX4P78413 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC18.08■□□□□ 0.48
IRX4P78413 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC18.08■□□□□ 0.48
IRX4P78413 PRKN-208ENST00000610470 531 ntTSL 2 BASIC18.08■□□□□ 0.48
IRX4P78413 PRKN-209ENST00000612485 225 ntTSL 5 BASIC18.08■□□□□ 0.48
IRX4P78413 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.48
IRX4P78413 FAM215A-202ENST00000632077 792 ntBASIC18.08■□□□□ 0.48
IRX4P78413 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
IRX4P78413 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC18.08■□□□□ 0.48
IRX4P78413 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
IRX4P78413 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC18.08■□□□□ 0.48
IRX4P78413 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
IRX4P78413 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
IRX4P78413 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
IRX4P78413 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
IRX4P78413 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
IRX4P78413 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
IRX4P78413 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
IRX4P78413 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
IRX4P78413 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
IRX4P78413 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC18.07■□□□□ 0.48
IRX4P78413 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC18.07■□□□□ 0.48
IRX4P78413 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
IRX4P78413 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
IRX4P78413 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
IRX4P78413 BANP-227ENST00000626016 2144 ntTSL 2 BASIC18.07■□□□□ 0.48
IRX4P78413 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
IRX4P78413 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
IRX4P78413 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
IRX4P78413 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
IRX4P78413 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
IRX4P78413 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
IRX4P78413 HIST2H3DP1-201ENST00000401004 416 ntBASIC18.07■□□□□ 0.48
IRX4P78413 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC18.07■□□□□ 0.48
IRX4P78413 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC18.07■□□□□ 0.48
IRX4P78413 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC18.07■□□□□ 0.48
IRX4P78413 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
IRX4P78413 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC18.07■□□□□ 0.48
IRX4P78413 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
IRX4P78413 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
IRX4P78413 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
IRX4P78413 AC114341.1-201ENST00000618070 349 ntBASIC18.07■□□□□ 0.48
IRX4P78413 AC116407.3-201ENST00000623905 1129 ntBASIC18.07■□□□□ 0.48
IRX4P78413 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
IRX4P78413 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
IRX4P78413 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
IRX4P78413 AC006116.8-202ENST00000587620 1550 ntBASIC18.07■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 47.9 ms