Protein–RNA interactions for Protein: P61619

SEC61A1, Protein transport protein Sec61 subunit alpha isoform 1, humanhuman

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1P61619 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
SEC61A1P61619 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC15.25■□□□□ 0.03
SEC61A1P61619 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SEC61A1P61619 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SEC61A1P61619 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SEC61A1P61619 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC15.25■□□□□ 0.03
SEC61A1P61619 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
SEC61A1P61619 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
SEC61A1P61619 BX276092.5-203ENST00000456199 560 ntBASIC15.25■□□□□ 0.03
SEC61A1P61619 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC15.25■□□□□ 0.03
SEC61A1P61619 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC15.25■□□□□ 0.03
SEC61A1P61619 TK1-205ENST00000590862 642 ntTSL 3 BASIC15.25■□□□□ 0.03
SEC61A1P61619 NPAP1P7-201ENST00000613027 823 ntBASIC15.25■□□□□ 0.03
SEC61A1P61619 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC15.25■□□□□ 0.03
SEC61A1P61619 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
SEC61A1P61619 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC15.25■□□□□ 0.03
SEC61A1P61619 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
SEC61A1P61619 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC15.25■□□□□ 0.03
SEC61A1P61619 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
SEC61A1P61619 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
SEC61A1P61619 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SEC61A1P61619 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
SEC61A1P61619 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SEC61A1P61619 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC15.25■□□□□ 0.03
SEC61A1P61619 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SEC61A1P61619 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC15.25■□□□□ 0.03
SEC61A1P61619 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SEC61A1P61619 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC15.25■□□□□ 0.03
SEC61A1P61619 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
SEC61A1P61619 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC15.25■□□□□ 0.03
SEC61A1P61619 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SEC61A1P61619 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
SEC61A1P61619 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC15.25■□□□□ 0.03
SEC61A1P61619 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
SEC61A1P61619 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SEC61A1P61619 Z83836.1-201ENST00000624605 1642 ntBASIC15.25■□□□□ 0.03
SEC61A1P61619 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC15.24■□□□□ 0.03
SEC61A1P61619 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SEC61A1P61619 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
SEC61A1P61619 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SEC61A1P61619 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
SEC61A1P61619 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC15.24■□□□□ 0.03
SEC61A1P61619 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC15.24■□□□□ 0.03
SEC61A1P61619 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
SEC61A1P61619 OVCH1-AS1-204ENST00000641955 5529 ntBASIC15.24■□□□□ 0.03
SEC61A1P61619 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
SEC61A1P61619 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SEC61A1P61619 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC15.24■□□□□ 0.03
SEC61A1P61619 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SEC61A1P61619 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SEC61A1P61619 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SEC61A1P61619 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC15.24■□□□□ 0.03
SEC61A1P61619 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
SEC61A1P61619 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
SEC61A1P61619 TSPY22P-201ENST00000427496 604 ntBASIC15.24■□□□□ 0.03
SEC61A1P61619 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC15.24■□□□□ 0.03
SEC61A1P61619 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC15.24■□□□□ 0.03
SEC61A1P61619 TSSC2-201ENST00000450217 709 ntBASIC15.24■□□□□ 0.03
SEC61A1P61619 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SEC61A1P61619 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC15.24■□□□□ 0.03
SEC61A1P61619 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC15.24■□□□□ 0.03
SEC61A1P61619 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC15.24■□□□□ 0.03
SEC61A1P61619 AL121672.3-201ENST00000608644 468 ntBASIC15.24■□□□□ 0.03
SEC61A1P61619 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
SEC61A1P61619 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
SEC61A1P61619 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SEC61A1P61619 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
SEC61A1P61619 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
SEC61A1P61619 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC15.24■□□□□ 0.03
SEC61A1P61619 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
SEC61A1P61619 PCDHA14-201ENST00000506751 2298 ntBASIC15.24■□□□□ 0.03
SEC61A1P61619 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
SEC61A1P61619 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
SEC61A1P61619 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
SEC61A1P61619 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SEC61A1P61619 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC15.24■□□□□ 0.03
SEC61A1P61619 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC15.24■□□□□ 0.03
SEC61A1P61619 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SEC61A1P61619 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC15.24■□□□□ 0.03
SEC61A1P61619 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SEC61A1P61619 AC103702.1-201ENST00000548801 2630 ntBASIC15.24■□□□□ 0.03
SEC61A1P61619 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC15.24■□□□□ 0.03
SEC61A1P61619 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC15.24■□□□□ 0.03
SEC61A1P61619 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC15.24■□□□□ 0.03
SEC61A1P61619 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
SEC61A1P61619 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SEC61A1P61619 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SEC61A1P61619 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SEC61A1P61619 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
SEC61A1P61619 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC15.23■□□□□ 0.03
SEC61A1P61619 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
SEC61A1P61619 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
SEC61A1P61619 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
SEC61A1P61619 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC15.23■□□□□ 0.03
SEC61A1P61619 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
SEC61A1P61619 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
SEC61A1P61619 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC15.23■□□□□ 0.03
SEC61A1P61619 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SEC61A1P61619 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
SEC61A1P61619 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 53.9 ms