Protein–RNA interactions for Protein: P49238

CX3CR1, CX3C chemokine receptor 1, humanhuman

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CR1P49238 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC15.28■□□□□ 0.04
CX3CR1P49238 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CX3CR1P49238 NF2-208ENST00000403435 2568 ntTSL 5 BASIC15.28■□□□□ 0.04
CX3CR1P49238 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC15.28■□□□□ 0.04
CX3CR1P49238 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CX3CR1P49238 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CX3CR1P49238 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC15.28■□□□□ 0.04
CX3CR1P49238 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CX3CR1P49238 AL031133.1-201ENST00000406807 723 ntBASIC15.28■□□□□ 0.04
CX3CR1P49238 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC15.28■□□□□ 0.04
CX3CR1P49238 AL845331.1-201ENST00000424978 1190 ntBASIC15.28■□□□□ 0.04
CX3CR1P49238 VENTXP7-201ENST00000475503 772 ntBASIC15.28■□□□□ 0.04
CX3CR1P49238 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CX3CR1P49238 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC15.28■□□□□ 0.04
CX3CR1P49238 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC15.28■□□□□ 0.04
CX3CR1P49238 AC005336.2-201ENST00000593183 939 ntBASIC15.28■□□□□ 0.04
CX3CR1P49238 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC15.28■□□□□ 0.04
CX3CR1P49238 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC15.28■□□□□ 0.04
CX3CR1P49238 AL138831.2-201ENST00000606564 490 ntBASIC15.28■□□□□ 0.04
CX3CR1P49238 AC019129.2-201ENST00000609837 1235 ntBASIC15.28■□□□□ 0.04
CX3CR1P49238 AL353801.3-201ENST00000609898 542 ntBASIC15.28■□□□□ 0.04
CX3CR1P49238 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC15.28■□□□□ 0.04
CX3CR1P49238 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC15.28■□□□□ 0.04
CX3CR1P49238 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
CX3CR1P49238 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
CX3CR1P49238 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC15.28■□□□□ 0.04
CX3CR1P49238 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CX3CR1P49238 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC15.28■□□□□ 0.04
CX3CR1P49238 AL118508.1-201ENST00000613502 2345 ntBASIC15.28■□□□□ 0.04
CX3CR1P49238 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CX3CR1P49238 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CX3CR1P49238 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
CX3CR1P49238 AC011676.5-201ENST00000624864 2660 ntBASIC15.28■□□□□ 0.04
CX3CR1P49238 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CX3CR1P49238 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CX3CR1P49238 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC15.28■□□□□ 0.04
CX3CR1P49238 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CX3CR1P49238 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CX3CR1P49238 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC15.28■□□□□ 0.04
CX3CR1P49238 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CX3CR1P49238 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CX3CR1P49238 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC15.27■□□□□ 0.04
CX3CR1P49238 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
CX3CR1P49238 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
CX3CR1P49238 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
CX3CR1P49238 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
CX3CR1P49238 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CX3CR1P49238 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
CX3CR1P49238 FXN-203ENST00000396366 922 ntTSL 2 BASIC15.27■□□□□ 0.04
CX3CR1P49238 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC15.27■□□□□ 0.04
CX3CR1P49238 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
CX3CR1P49238 BX276092.5-203ENST00000456199 560 ntBASIC15.27■□□□□ 0.04
CX3CR1P49238 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC15.27■□□□□ 0.04
CX3CR1P49238 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC15.27■□□□□ 0.04
CX3CR1P49238 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC15.27■□□□□ 0.04
CX3CR1P49238 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC15.27■□□□□ 0.04
CX3CR1P49238 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC15.27■□□□□ 0.04
CX3CR1P49238 AL121672.3-201ENST00000608644 468 ntBASIC15.27■□□□□ 0.04
CX3CR1P49238 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC15.27■□□□□ 0.03
CX3CR1P49238 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC15.27■□□□□ 0.03
CX3CR1P49238 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC15.27■□□□□ 0.03
CX3CR1P49238 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
CX3CR1P49238 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC15.27■□□□□ 0.03
CX3CR1P49238 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
CX3CR1P49238 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.03
CX3CR1P49238 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
CX3CR1P49238 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
CX3CR1P49238 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
CX3CR1P49238 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC15.27■□□□□ 0.03
CX3CR1P49238 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
CX3CR1P49238 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
CX3CR1P49238 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.03
CX3CR1P49238 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC15.27■□□□□ 0.03
CX3CR1P49238 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.03
CX3CR1P49238 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
CX3CR1P49238 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
CX3CR1P49238 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC15.27■□□□□ 0.03
CX3CR1P49238 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
CX3CR1P49238 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC15.26■□□□□ 0.03
CX3CR1P49238 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CX3CR1P49238 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CX3CR1P49238 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CX3CR1P49238 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC15.26■□□□□ 0.03
CX3CR1P49238 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CX3CR1P49238 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
CX3CR1P49238 AC116353.5-201ENST00000638148 1699 ntBASIC15.26■□□□□ 0.03
CX3CR1P49238 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CX3CR1P49238 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
CX3CR1P49238 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CX3CR1P49238 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC15.26■□□□□ 0.03
CX3CR1P49238 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC15.26■□□□□ 0.03
CX3CR1P49238 AC005332.1-201ENST00000577698 1310 ntBASIC15.26■□□□□ 0.03
CX3CR1P49238 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC15.26■□□□□ 0.03
CX3CR1P49238 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
CX3CR1P49238 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC15.26■□□□□ 0.03
CX3CR1P49238 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
CX3CR1P49238 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CX3CR1P49238 AC122714.2-201ENST00000502787 707 ntBASIC15.26■□□□□ 0.03
CX3CR1P49238 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC15.26■□□□□ 0.03
CX3CR1P49238 NTF6B-201ENST00000591913 560 ntBASIC15.26■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms