Protein–RNA interactions for Protein: P41273

TNFSF9, Tumor necrosis factor ligand superfamily member 9, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF9P41273 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TNFSF9P41273 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
TNFSF9P41273 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TNFSF9P41273 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
TNFSF9P41273 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC18.74■□□□□ 0.59
TNFSF9P41273 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TNFSF9P41273 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC18.74■□□□□ 0.59
TNFSF9P41273 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC18.74■□□□□ 0.59
TNFSF9P41273 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
TNFSF9P41273 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TNFSF9P41273 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
TNFSF9P41273 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TNFSF9P41273 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC18.74■□□□□ 0.59
TNFSF9P41273 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
TNFSF9P41273 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
TNFSF9P41273 AC009947.1-201ENST00000444350 727 ntBASIC18.74■□□□□ 0.59
TNFSF9P41273 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
TNFSF9P41273 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC18.74■□□□□ 0.59
TNFSF9P41273 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TNFSF9P41273 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC18.74■□□□□ 0.59
TNFSF9P41273 AC034105.1-201ENST00000563488 319 ntBASIC18.74■□□□□ 0.59
TNFSF9P41273 AC145285.3-201ENST00000564603 959 ntBASIC18.74■□□□□ 0.59
TNFSF9P41273 AC106730.1-201ENST00000566722 1090 ntBASIC18.74■□□□□ 0.59
TNFSF9P41273 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC18.74■□□□□ 0.59
TNFSF9P41273 AC005593.1-201ENST00000624894 515 ntBASIC18.74■□□□□ 0.59
TNFSF9P41273 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
TNFSF9P41273 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TNFSF9P41273 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TNFSF9P41273 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC18.74■□□□□ 0.59
TNFSF9P41273 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
TNFSF9P41273 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TNFSF9P41273 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC18.74■□□□□ 0.59
TNFSF9P41273 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
TNFSF9P41273 EML3-212ENST00000494176 2901 ntTSL 2 BASIC18.73■□□□□ 0.59
TNFSF9P41273 EML3-216ENST00000529309 2909 ntTSL 2 BASIC18.73■□□□□ 0.59
TNFSF9P41273 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC18.73■□□□□ 0.59
TNFSF9P41273 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
TNFSF9P41273 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
TNFSF9P41273 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC18.73■□□□□ 0.59
TNFSF9P41273 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC18.73■□□□□ 0.59
TNFSF9P41273 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
TNFSF9P41273 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
TNFSF9P41273 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
TNFSF9P41273 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC18.73■□□□□ 0.59
TNFSF9P41273 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
TNFSF9P41273 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC18.73■□□□□ 0.59
TNFSF9P41273 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
TNFSF9P41273 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
TNFSF9P41273 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC18.73■□□□□ 0.59
TNFSF9P41273 AC016396.2-201ENST00000562575 1417 ntBASIC18.73■□□□□ 0.59
TNFSF9P41273 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
TNFSF9P41273 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
TNFSF9P41273 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
TNFSF9P41273 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC18.73■□□□□ 0.59
TNFSF9P41273 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TNFSF9P41273 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
TNFSF9P41273 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC18.72■□□□□ 0.59
TNFSF9P41273 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
TNFSF9P41273 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC18.72■□□□□ 0.59
TNFSF9P41273 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC18.72■□□□□ 0.59
TNFSF9P41273 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC18.72■□□□□ 0.59
TNFSF9P41273 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
TNFSF9P41273 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
TNFSF9P41273 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TNFSF9P41273 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
TNFSF9P41273 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
TNFSF9P41273 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC18.72■□□□□ 0.59
TNFSF9P41273 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TNFSF9P41273 Z83851.2-201ENST00000609564 659 ntBASIC18.72■□□□□ 0.59
TNFSF9P41273 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC18.72■□□□□ 0.59
TNFSF9P41273 AL805961.1-202ENST00000641562 540 ntBASIC18.72■□□□□ 0.59
TNFSF9P41273 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TNFSF9P41273 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC18.72■□□□□ 0.59
TNFSF9P41273 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
TNFSF9P41273 AC116353.5-201ENST00000638148 1699 ntBASIC18.72■□□□□ 0.59
TNFSF9P41273 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
TNFSF9P41273 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
TNFSF9P41273 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TNFSF9P41273 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC18.72■□□□□ 0.59
TNFSF9P41273 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC18.72■□□□□ 0.59
TNFSF9P41273 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC18.72■□□□□ 0.59
TNFSF9P41273 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC18.72■□□□□ 0.59
TNFSF9P41273 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC18.72■□□□□ 0.59
TNFSF9P41273 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
TNFSF9P41273 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
TNFSF9P41273 AC106820.2-201ENST00000563775 3264 ntBASIC18.71■□□□□ 0.59
TNFSF9P41273 BANP-227ENST00000626016 2144 ntTSL 2 BASIC18.71■□□□□ 0.59
TNFSF9P41273 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC18.71■□□□□ 0.59
TNFSF9P41273 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC18.71■□□□□ 0.59
TNFSF9P41273 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
TNFSF9P41273 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC18.71■□□□□ 0.59
TNFSF9P41273 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC18.71■□□□□ 0.59
TNFSF9P41273 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TNFSF9P41273 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TNFSF9P41273 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC18.71■□□□□ 0.59
TNFSF9P41273 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TNFSF9P41273 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC18.71■□□□□ 0.59
TNFSF9P41273 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC18.71■□□□□ 0.59
TNFSF9P41273 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC18.71■□□□□ 0.59
TNFSF9P41273 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 58 ms