Protein–RNA interactions for Protein: P35790

CHKA, Choline kinase alpha, humanhuman

Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHKAP35790 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CHKAP35790 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CHKAP35790 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CHKAP35790 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC18.34■□□□□ 0.53
CHKAP35790 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC18.34■□□□□ 0.53
CHKAP35790 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC18.34■□□□□ 0.53
CHKAP35790 AF186996.4-201ENST00000467186 377 ntBASIC18.34■□□□□ 0.53
CHKAP35790 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC18.34■□□□□ 0.53
CHKAP35790 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC18.34■□□□□ 0.53
CHKAP35790 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC18.34■□□□□ 0.53
CHKAP35790 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC18.34■□□□□ 0.53
CHKAP35790 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CHKAP35790 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC18.34■□□□□ 0.53
CHKAP35790 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CHKAP35790 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CHKAP35790 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC18.34■□□□□ 0.53
CHKAP35790 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC18.34■□□□□ 0.53
CHKAP35790 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
CHKAP35790 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC18.34■□□□□ 0.53
CHKAP35790 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC18.34■□□□□ 0.53
CHKAP35790 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CHKAP35790 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CHKAP35790 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CHKAP35790 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CHKAP35790 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CHKAP35790 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CHKAP35790 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC18.34■□□□□ 0.53
CHKAP35790 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC18.33■□□□□ 0.53
CHKAP35790 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CHKAP35790 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CHKAP35790 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
CHKAP35790 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CHKAP35790 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC18.33■□□□□ 0.53
CHKAP35790 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
CHKAP35790 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
CHKAP35790 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
CHKAP35790 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CHKAP35790 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
CHKAP35790 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC18.33■□□□□ 0.52
CHKAP35790 SOD2-201ENST00000337404 991 ntTSL 2 BASIC18.33■□□□□ 0.52
CHKAP35790 MRPL3P1-201ENST00000400109 1033 ntBASIC18.33■□□□□ 0.52
CHKAP35790 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
CHKAP35790 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC18.33■□□□□ 0.52
CHKAP35790 FGFR3P6-201ENST00000457012 610 ntBASIC18.33■□□□□ 0.52
CHKAP35790 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
CHKAP35790 PENK-208ENST00000523051 772 ntTSL 5 BASIC18.33■□□□□ 0.52
CHKAP35790 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC18.33■□□□□ 0.52
CHKAP35790 AL773604.1-201ENST00000617417 272 ntBASIC18.33■□□□□ 0.52
CHKAP35790 TP73-AS1-207ENST00000624167 988 ntBASIC18.33■□□□□ 0.52
CHKAP35790 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC18.33■□□□□ 0.52
CHKAP35790 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
CHKAP35790 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC18.33■□□□□ 0.52
CHKAP35790 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC18.33■□□□□ 0.52
CHKAP35790 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
CHKAP35790 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
CHKAP35790 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC18.33■□□□□ 0.52
CHKAP35790 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
CHKAP35790 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CHKAP35790 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
CHKAP35790 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CHKAP35790 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC18.33■□□□□ 0.52
CHKAP35790 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CHKAP35790 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC18.33■□□□□ 0.52
CHKAP35790 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
CHKAP35790 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC18.33■□□□□ 0.52
CHKAP35790 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CHKAP35790 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC18.32■□□□□ 0.52
CHKAP35790 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CHKAP35790 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CHKAP35790 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CHKAP35790 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
CHKAP35790 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
CHKAP35790 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CHKAP35790 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CHKAP35790 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CHKAP35790 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CHKAP35790 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CHKAP35790 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CHKAP35790 MED22-202ENST00000371999 987 ntTSL 3 BASIC18.32■□□□□ 0.52
CHKAP35790 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
CHKAP35790 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CHKAP35790 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC18.32■□□□□ 0.52
CHKAP35790 KRT18P67-201ENST00000432816 1264 ntBASIC18.32■□□□□ 0.52
CHKAP35790 AC103564.2-201ENST00000432853 1299 ntBASIC18.32■□□□□ 0.52
CHKAP35790 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC18.32■□□□□ 0.52
CHKAP35790 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC18.32■□□□□ 0.52
CHKAP35790 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC18.32■□□□□ 0.52
CHKAP35790 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC18.32■□□□□ 0.52
CHKAP35790 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC18.32■□□□□ 0.52
CHKAP35790 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
CHKAP35790 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC18.32■□□□□ 0.52
CHKAP35790 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC18.32■□□□□ 0.52
CHKAP35790 AC010460.3-201ENST00000511359 1579 ntBASIC18.32■□□□□ 0.52
CHKAP35790 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CHKAP35790 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CHKAP35790 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC18.32■□□□□ 0.52
CHKAP35790 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
CHKAP35790 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
CHKAP35790 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CHKAP35790 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC18.32■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 22.9 ms