Protein–RNA interactions for Protein: P24386

CHM, Rab proteins geranylgeranyltransferase component A 1, humanhuman

Predictions only

Length 653 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP24386 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC16.26■□□□□ 0.19
CHMP24386 AC106886.4-201ENST00000623557 2502 ntBASIC16.26■□□□□ 0.19
CHMP24386 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CHMP24386 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC16.26■□□□□ 0.19
CHMP24386 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC16.26■□□□□ 0.19
CHMP24386 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC16.26■□□□□ 0.19
CHMP24386 AC018695.7-201ENST00000624587 2492 ntBASIC16.26■□□□□ 0.19
CHMP24386 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
CHMP24386 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
CHMP24386 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CHMP24386 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC16.26■□□□□ 0.19
CHMP24386 AC009949.1-201ENST00000623048 1830 ntBASIC16.26■□□□□ 0.19
CHMP24386 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC16.26■□□□□ 0.19
CHMP24386 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CHMP24386 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC16.26■□□□□ 0.19
CHMP24386 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CHMP24386 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CHMP24386 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CHMP24386 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CHMP24386 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
CHMP24386 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CHMP24386 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CHMP24386 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC16.25■□□□□ 0.19
CHMP24386 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC16.25■□□□□ 0.19
CHMP24386 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CHMP24386 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
CHMP24386 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CHMP24386 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC16.25■□□□□ 0.19
CHMP24386 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CHMP24386 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CHMP24386 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CHMP24386 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC16.25■□□□□ 0.19
CHMP24386 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC16.25■□□□□ 0.19
CHMP24386 MTCL1P1-201ENST00000446207 792 ntBASIC16.25■□□□□ 0.19
CHMP24386 KRT17P6-201ENST00000453795 1220 ntBASIC16.25■□□□□ 0.19
CHMP24386 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC16.25■□□□□ 0.19
CHMP24386 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CHMP24386 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
CHMP24386 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC16.25■□□□□ 0.19
CHMP24386 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC16.25■□□□□ 0.19
CHMP24386 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC16.25■□□□□ 0.19
CHMP24386 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
CHMP24386 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC16.25■□□□□ 0.19
CHMP24386 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CHMP24386 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC16.25■□□□□ 0.19
CHMP24386 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
CHMP24386 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC16.25■□□□□ 0.19
CHMP24386 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC16.25■□□□□ 0.19
CHMP24386 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CHMP24386 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC16.25■□□□□ 0.19
CHMP24386 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC16.25■□□□□ 0.19
CHMP24386 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC16.24■□□□□ 0.19
CHMP24386 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CHMP24386 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC16.24■□□□□ 0.19
CHMP24386 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC16.24■□□□□ 0.19
CHMP24386 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC16.24■□□□□ 0.19
CHMP24386 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC16.24■□□□□ 0.19
CHMP24386 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
CHMP24386 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC16.24■□□□□ 0.19
CHMP24386 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC16.24■□□□□ 0.19
CHMP24386 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CHMP24386 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CHMP24386 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
CHMP24386 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
CHMP24386 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CHMP24386 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CHMP24386 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CHMP24386 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC16.24■□□□□ 0.19
CHMP24386 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CHMP24386 AL845331.1-201ENST00000424978 1190 ntBASIC16.24■□□□□ 0.19
CHMP24386 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
CHMP24386 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC16.24■□□□□ 0.19
CHMP24386 AC074051.2-201ENST00000565115 352 ntBASIC16.24■□□□□ 0.19
CHMP24386 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC16.24■□□□□ 0.19
CHMP24386 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC16.24■□□□□ 0.19
CHMP24386 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CHMP24386 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CHMP24386 AC116407.2-201ENST00000613639 860 ntBASIC16.24■□□□□ 0.19
CHMP24386 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CHMP24386 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC16.24■□□□□ 0.19
CHMP24386 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
CHMP24386 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CHMP24386 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC16.24■□□□□ 0.19
CHMP24386 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
CHMP24386 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC16.24■□□□□ 0.19
CHMP24386 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CHMP24386 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
CHMP24386 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
CHMP24386 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC16.24■□□□□ 0.19
CHMP24386 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CHMP24386 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
CHMP24386 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
CHMP24386 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
CHMP24386 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CHMP24386 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC16.23■□□□□ 0.19
CHMP24386 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC16.23■□□□□ 0.19
CHMP24386 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
CHMP24386 UBALD1-205ENST00000590891 2641 ntBASIC16.23■□□□□ 0.19
CHMP24386 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC16.23■□□□□ 0.19
CHMP24386 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 46.8 ms