Protein–RNA interactions for Protein: P19338

NCL, Nucleolin, humanhuman

Known RBP Predictions only

Length 710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCLP19338 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
NCLP19338 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC20.7■□□□□ 0.9
NCLP19338 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
NCLP19338 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
NCLP19338 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
NCLP19338 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
NCLP19338 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
NCLP19338 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
NCLP19338 FAM8A6P-201ENST00000407496 1135 ntBASIC20.7■□□□□ 0.9
NCLP19338 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
NCLP19338 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
NCLP19338 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
NCLP19338 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC20.7■□□□□ 0.9
NCLP19338 TSPY5P-201ENST00000426936 936 ntBASIC20.7■□□□□ 0.9
NCLP19338 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
NCLP19338 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC20.7■□□□□ 0.9
NCLP19338 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
NCLP19338 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
NCLP19338 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
NCLP19338 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
NCLP19338 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC20.7■□□□□ 0.9
NCLP19338 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
NCLP19338 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC20.7■□□□□ 0.9
NCLP19338 REEP1-209ENST00000541910 969 ntTSL 2 BASIC20.7■□□□□ 0.9
NCLP19338 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
NCLP19338 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC20.7■□□□□ 0.9
NCLP19338 AC087388.1-201ENST00000571370 1112 ntBASIC20.7■□□□□ 0.9
NCLP19338 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC20.7■□□□□ 0.9
NCLP19338 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
NCLP19338 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC20.7■□□□□ 0.9
NCLP19338 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
NCLP19338 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
NCLP19338 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
NCLP19338 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC20.7■□□□□ 0.9
NCLP19338 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
NCLP19338 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
NCLP19338 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
NCLP19338 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
NCLP19338 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC20.7■□□□□ 0.9
NCLP19338 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
NCLP19338 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
NCLP19338 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
NCLP19338 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
NCLP19338 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
NCLP19338 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
NCLP19338 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
NCLP19338 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
NCLP19338 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC20.69■□□□□ 0.9
NCLP19338 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
NCLP19338 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC20.69■□□□□ 0.9
NCLP19338 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
NCLP19338 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
NCLP19338 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
NCLP19338 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
NCLP19338 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
NCLP19338 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC20.69■□□□□ 0.9
NCLP19338 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
NCLP19338 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
NCLP19338 SEC1P-202ENST00000473944 940 ntBASIC20.69■□□□□ 0.9
NCLP19338 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC20.69■□□□□ 0.9
NCLP19338 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
NCLP19338 AL031432.5-201ENST00000641059 760 ntBASIC20.69■□□□□ 0.9
NCLP19338 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
NCLP19338 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
NCLP19338 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
NCLP19338 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
NCLP19338 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
NCLP19338 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
NCLP19338 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
NCLP19338 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC20.69■□□□□ 0.9
NCLP19338 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
NCLP19338 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC20.69■□□□□ 0.9
NCLP19338 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
NCLP19338 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
NCLP19338 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
NCLP19338 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC20.68■□□□□ 0.9
NCLP19338 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
NCLP19338 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
NCLP19338 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC20.68■□□□□ 0.9
NCLP19338 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC20.68■□□□□ 0.9
NCLP19338 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
NCLP19338 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
NCLP19338 AC063926.3-201ENST00000624734 5658 ntBASIC20.68■□□□□ 0.9
NCLP19338 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC20.68■□□□□ 0.9
NCLP19338 AC105020.1-201ENST00000435356 2205 ntBASIC20.68■□□□□ 0.9
NCLP19338 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
NCLP19338 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
NCLP19338 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
NCLP19338 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
NCLP19338 AC009947.2-201ENST00000444014 672 ntBASIC20.68■□□□□ 0.9
NCLP19338 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC20.68■□□□□ 0.9
NCLP19338 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
NCLP19338 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC20.68■□□□□ 0.9
NCLP19338 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC20.68■□□□□ 0.9
NCLP19338 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC20.68■□□□□ 0.9
NCLP19338 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
NCLP19338 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC20.68■□□□□ 0.9
NCLP19338 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC20.68■□□□□ 0.9
NCLP19338 AC011558.1-201ENST00000623459 338 ntBASIC20.68■□□□□ 0.9
NCLP19338 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 81.2 ms