Protein–RNA interactions for Protein: P12645

BMP3, Bone morphogenetic protein 3, humanhuman

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BMP3P12645 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC19.95■□□□□ 0.78
BMP3P12645 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
BMP3P12645 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC19.95■□□□□ 0.78
BMP3P12645 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC19.95■□□□□ 0.78
BMP3P12645 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
BMP3P12645 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC19.95■□□□□ 0.78
BMP3P12645 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC19.95■□□□□ 0.78
BMP3P12645 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
BMP3P12645 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC19.95■□□□□ 0.78
BMP3P12645 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
BMP3P12645 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
BMP3P12645 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
BMP3P12645 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
BMP3P12645 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
BMP3P12645 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
BMP3P12645 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
BMP3P12645 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC19.94■□□□□ 0.78
BMP3P12645 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
BMP3P12645 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
BMP3P12645 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
BMP3P12645 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC19.94■□□□□ 0.78
BMP3P12645 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC19.94■□□□□ 0.78
BMP3P12645 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
BMP3P12645 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC19.94■□□□□ 0.78
BMP3P12645 AC087163.2-201ENST00000457299 853 ntBASIC19.94■□□□□ 0.78
BMP3P12645 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC19.94■□□□□ 0.78
BMP3P12645 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC19.94■□□□□ 0.78
BMP3P12645 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC19.94■□□□□ 0.78
BMP3P12645 KRT19P2-202ENST00000557173 1012 ntBASIC19.94■□□□□ 0.78
BMP3P12645 PDPK2P-202ENST00000562415 1191 ntBASIC19.94■□□□□ 0.78
BMP3P12645 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC19.94■□□□□ 0.78
BMP3P12645 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
BMP3P12645 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC19.94■□□□□ 0.78
BMP3P12645 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
BMP3P12645 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
BMP3P12645 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
BMP3P12645 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
BMP3P12645 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
BMP3P12645 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
BMP3P12645 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
BMP3P12645 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
BMP3P12645 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC19.93■□□□□ 0.78
BMP3P12645 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
BMP3P12645 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
BMP3P12645 GNE-204ENST00000539208 2190 ntTSL 2 BASIC19.93■□□□□ 0.78
BMP3P12645 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
BMP3P12645 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
BMP3P12645 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
BMP3P12645 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC19.93■□□□□ 0.78
BMP3P12645 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC19.93■□□□□ 0.78
BMP3P12645 AC004967.1-201ENST00000453589 447 ntBASIC19.93■□□□□ 0.78
BMP3P12645 SLC25A6P2-201ENST00000497974 877 ntBASIC19.93■□□□□ 0.78
BMP3P12645 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC19.93■□□□□ 0.78
BMP3P12645 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC19.93■□□□□ 0.78
BMP3P12645 AC005829.1-201ENST00000570002 483 ntBASIC19.93■□□□□ 0.78
BMP3P12645 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC19.93■□□□□ 0.78
BMP3P12645 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
BMP3P12645 AC134684.3-201ENST00000641758 218 ntBASIC19.93■□□□□ 0.78
BMP3P12645 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC19.93■□□□□ 0.78
BMP3P12645 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
BMP3P12645 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
BMP3P12645 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
BMP3P12645 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC19.93■□□□□ 0.78
BMP3P12645 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
BMP3P12645 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
BMP3P12645 AC025580.3-201ENST00000617932 1424 ntBASIC19.93■□□□□ 0.78
BMP3P12645 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
BMP3P12645 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC19.92■□□□□ 0.78
BMP3P12645 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
BMP3P12645 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC19.92■□□□□ 0.78
BMP3P12645 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
BMP3P12645 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC19.92■□□□□ 0.78
BMP3P12645 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC19.92■□□□□ 0.78
BMP3P12645 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
BMP3P12645 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC19.92■□□□□ 0.78
BMP3P12645 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC19.92■□□□□ 0.78
BMP3P12645 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC19.92■□□□□ 0.78
BMP3P12645 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
BMP3P12645 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
BMP3P12645 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
BMP3P12645 RPS8P6-201ENST00000426177 609 ntBASIC19.92■□□□□ 0.78
BMP3P12645 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC19.92■□□□□ 0.78
BMP3P12645 FAM185BP-201ENST00000443595 716 ntBASIC19.92■□□□□ 0.78
BMP3P12645 AC092183.1-201ENST00000469884 875 ntBASIC19.92■□□□□ 0.78
BMP3P12645 ALG1L5P-201ENST00000482043 771 ntBASIC19.92■□□□□ 0.78
BMP3P12645 SMN2-210ENST00000511812 867 ntTSL 2 BASIC19.92■□□□□ 0.78
BMP3P12645 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC19.92■□□□□ 0.78
BMP3P12645 AC023141.13-201ENST00000604991 943 ntBASIC19.92■□□□□ 0.78
BMP3P12645 C20orf181-201ENST00000623918 480 ntBASIC19.92■□□□□ 0.78
BMP3P12645 AC007064.4-201ENST00000637740 555 ntBASIC19.92■□□□□ 0.78
BMP3P12645 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC19.92■□□□□ 0.78
BMP3P12645 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
BMP3P12645 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC19.92■□□□□ 0.78
BMP3P12645 AC134043.2-201ENST00000624206 2238 ntBASIC19.92■□□□□ 0.78
BMP3P12645 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC19.92■□□□□ 0.78
BMP3P12645 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
BMP3P12645 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
BMP3P12645 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
BMP3P12645 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
BMP3P12645 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 55.7 ms