Protein–RNA interactions for Protein: P02538

KRT6A, Keratin, type II cytoskeletal 6A, humanhuman

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT6AP02538 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
KRT6AP02538 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC16.85■□□□□ 0.29
KRT6AP02538 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC16.85■□□□□ 0.29
KRT6AP02538 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC16.85■□□□□ 0.29
KRT6AP02538 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC16.85■□□□□ 0.29
KRT6AP02538 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
KRT6AP02538 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC16.85■□□□□ 0.29
KRT6AP02538 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC16.85■□□□□ 0.29
KRT6AP02538 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC16.85■□□□□ 0.29
KRT6AP02538 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC16.85■□□□□ 0.29
KRT6AP02538 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
KRT6AP02538 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
KRT6AP02538 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
KRT6AP02538 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
KRT6AP02538 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC16.85■□□□□ 0.29
KRT6AP02538 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
KRT6AP02538 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
KRT6AP02538 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
KRT6AP02538 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
KRT6AP02538 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
KRT6AP02538 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC16.84■□□□□ 0.29
KRT6AP02538 AC046185.3-201ENST00000623228 1824 ntBASIC16.84■□□□□ 0.29
KRT6AP02538 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC16.84■□□□□ 0.29
KRT6AP02538 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
KRT6AP02538 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
KRT6AP02538 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
KRT6AP02538 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
KRT6AP02538 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
KRT6AP02538 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
KRT6AP02538 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
KRT6AP02538 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
KRT6AP02538 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
KRT6AP02538 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
KRT6AP02538 AL845331.1-201ENST00000424978 1190 ntBASIC16.84■□□□□ 0.29
KRT6AP02538 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC16.84■□□□□ 0.29
KRT6AP02538 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC16.84■□□□□ 0.29
KRT6AP02538 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC16.84■□□□□ 0.29
KRT6AP02538 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
KRT6AP02538 BX276092.5-203ENST00000456199 560 ntBASIC16.84■□□□□ 0.29
KRT6AP02538 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC16.84■□□□□ 0.29
KRT6AP02538 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC16.84■□□□□ 0.29
KRT6AP02538 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC16.84■□□□□ 0.29
KRT6AP02538 AC005336.2-201ENST00000593183 939 ntBASIC16.84■□□□□ 0.29
KRT6AP02538 AL121672.3-201ENST00000608644 468 ntBASIC16.84■□□□□ 0.29
KRT6AP02538 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
KRT6AP02538 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
KRT6AP02538 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
KRT6AP02538 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
KRT6AP02538 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
KRT6AP02538 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC16.84■□□□□ 0.29
KRT6AP02538 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
KRT6AP02538 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC16.84■□□□□ 0.29
KRT6AP02538 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
KRT6AP02538 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
KRT6AP02538 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC16.84■□□□□ 0.29
KRT6AP02538 RHBDF1P1-201ENST00000427504 1941 ntBASIC16.84■□□□□ 0.29
KRT6AP02538 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC16.84■□□□□ 0.29
KRT6AP02538 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
KRT6AP02538 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
KRT6AP02538 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
KRT6AP02538 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
KRT6AP02538 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
KRT6AP02538 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC16.84■□□□□ 0.29
KRT6AP02538 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC16.83■□□□□ 0.29
KRT6AP02538 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.29
KRT6AP02538 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
KRT6AP02538 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.29
KRT6AP02538 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.29
KRT6AP02538 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.29
KRT6AP02538 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
KRT6AP02538 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
KRT6AP02538 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC16.83■□□□□ 0.28
KRT6AP02538 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
KRT6AP02538 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
KRT6AP02538 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
KRT6AP02538 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC16.83■□□□□ 0.28
KRT6AP02538 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC16.83■□□□□ 0.28
KRT6AP02538 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC16.83■□□□□ 0.28
KRT6AP02538 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC16.83■□□□□ 0.28
KRT6AP02538 DANCR-204ENST00000444958 709 ntTSL 3 BASIC16.83■□□□□ 0.28
KRT6AP02538 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
KRT6AP02538 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
KRT6AP02538 AC009533.2-201ENST00000543664 586 ntBASIC16.83■□□□□ 0.28
KRT6AP02538 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
KRT6AP02538 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
KRT6AP02538 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC16.83■□□□□ 0.28
KRT6AP02538 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC16.83■□□□□ 0.28
KRT6AP02538 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC16.83■□□□□ 0.28
KRT6AP02538 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC16.83■□□□□ 0.28
KRT6AP02538 AC093525.9-201ENST00000624961 1746 ntBASIC16.83■□□□□ 0.28
KRT6AP02538 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC16.83■□□□□ 0.28
KRT6AP02538 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC16.83■□□□□ 0.28
KRT6AP02538 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC16.83■□□□□ 0.28
KRT6AP02538 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
KRT6AP02538 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC16.83■□□□□ 0.28
KRT6AP02538 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
KRT6AP02538 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
KRT6AP02538 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC16.82■□□□□ 0.28
KRT6AP02538 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
KRT6AP02538 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 36.4 ms