Protein–RNA interactions for Protein: P01033

TIMP1, Metalloproteinase inhibitor 1, humanhuman

Predictions only

Length 207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP1P01033 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
TIMP1P01033 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC18.58■□□□□ 0.56
TIMP1P01033 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
TIMP1P01033 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
TIMP1P01033 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
TIMP1P01033 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
TIMP1P01033 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
TIMP1P01033 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC18.58■□□□□ 0.56
TIMP1P01033 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC18.57■□□□□ 0.56
TIMP1P01033 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
TIMP1P01033 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
TIMP1P01033 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC18.57■□□□□ 0.56
TIMP1P01033 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
TIMP1P01033 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC18.57■□□□□ 0.56
TIMP1P01033 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
TIMP1P01033 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
TIMP1P01033 REXO1L11P-201ENST00000620964 1927 ntBASIC18.57■□□□□ 0.56
TIMP1P01033 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
TIMP1P01033 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
TIMP1P01033 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
TIMP1P01033 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
TIMP1P01033 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
TIMP1P01033 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC18.57■□□□□ 0.56
TIMP1P01033 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC18.57■□□□□ 0.56
TIMP1P01033 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
TIMP1P01033 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC18.57■□□□□ 0.56
TIMP1P01033 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC18.57■□□□□ 0.56
TIMP1P01033 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC18.57■□□□□ 0.56
TIMP1P01033 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC18.57■□□□□ 0.56
TIMP1P01033 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC18.57■□□□□ 0.56
TIMP1P01033 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC18.57■□□□□ 0.56
TIMP1P01033 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
TIMP1P01033 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC18.57■□□□□ 0.56
TIMP1P01033 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC18.57■□□□□ 0.56
TIMP1P01033 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC18.57■□□□□ 0.56
TIMP1P01033 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
TIMP1P01033 STK4-201ENST00000372801 2038 ntTSL 2 BASIC18.57■□□□□ 0.56
TIMP1P01033 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
TIMP1P01033 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC18.57■□□□□ 0.56
TIMP1P01033 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
TIMP1P01033 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC18.57■□□□□ 0.56
TIMP1P01033 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
TIMP1P01033 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
TIMP1P01033 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
TIMP1P01033 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC18.56■□□□□ 0.56
TIMP1P01033 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
TIMP1P01033 AC022144.1-201ENST00000602255 1580 ntBASIC18.56■□□□□ 0.56
TIMP1P01033 AC073130.3-201ENST00000624389 2278 ntBASIC18.56■□□□□ 0.56
TIMP1P01033 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC18.56■□□□□ 0.56
TIMP1P01033 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC18.56■□□□□ 0.56
TIMP1P01033 ALG5-201ENST00000239891 1154 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
TIMP1P01033 TOMM5-201ENST00000321301 751 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
TIMP1P01033 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
TIMP1P01033 CALY-202ENST00000368555 783 ntTSL 2 BASIC18.56■□□□□ 0.56
TIMP1P01033 DICER1-AS1-202ENST00000439819 810 ntTSL 3 BASIC18.56■□□□□ 0.56
TIMP1P01033 ATP5G2P4-201ENST00000442175 420 ntBASIC18.56■□□□□ 0.56
TIMP1P01033 KRT17P7-201ENST00000451704 1104 ntBASIC18.56■□□□□ 0.56
TIMP1P01033 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC18.56■□□□□ 0.56
TIMP1P01033 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
TIMP1P01033 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC18.56■□□□□ 0.56
TIMP1P01033 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC18.56■□□□□ 0.56
TIMP1P01033 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC18.56■□□□□ 0.56
TIMP1P01033 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC18.56■□□□□ 0.56
TIMP1P01033 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
TIMP1P01033 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
TIMP1P01033 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
TIMP1P01033 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
TIMP1P01033 CU639417.3-201ENST00000624240 1404 ntBASIC18.56■□□□□ 0.56
TIMP1P01033 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
TIMP1P01033 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
TIMP1P01033 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC18.55■□□□□ 0.56
TIMP1P01033 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
TIMP1P01033 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC18.55■□□□□ 0.56
TIMP1P01033 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC18.55■□□□□ 0.56
TIMP1P01033 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
TIMP1P01033 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC18.55■□□□□ 0.56
TIMP1P01033 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
TIMP1P01033 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC18.55■□□□□ 0.56
TIMP1P01033 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
TIMP1P01033 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC18.55■□□□□ 0.56
TIMP1P01033 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
TIMP1P01033 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
TIMP1P01033 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
TIMP1P01033 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC18.55■□□□□ 0.56
TIMP1P01033 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC18.55■□□□□ 0.56
TIMP1P01033 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC18.55■□□□□ 0.56
TIMP1P01033 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC18.55■□□□□ 0.56
TIMP1P01033 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
TIMP1P01033 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC18.55■□□□□ 0.56
TIMP1P01033 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
TIMP1P01033 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC18.55■□□□□ 0.56
TIMP1P01033 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC18.55■□□□□ 0.56
TIMP1P01033 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC18.55■□□□□ 0.56
TIMP1P01033 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
TIMP1P01033 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
TIMP1P01033 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC18.55■□□□□ 0.56
TIMP1P01033 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC18.55■□□□□ 0.56
TIMP1P01033 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
TIMP1P01033 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
TIMP1P01033 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC18.55■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms