Protein–RNA interactions for Protein: P00352

ALDH1A1, Retinal dehydrogenase 1, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALDH1A1P00352 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
ALDH1A1P00352 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
ALDH1A1P00352 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
ALDH1A1P00352 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
ALDH1A1P00352 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
ALDH1A1P00352 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
ALDH1A1P00352 HNRNPA3P1-201ENST00000401429 1139 ntBASIC19.62■□□□□ 0.73
ALDH1A1P00352 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC19.62■□□□□ 0.73
ALDH1A1P00352 HNRNPA3P5-201ENST00000455201 833 ntBASIC19.62■□□□□ 0.73
ALDH1A1P00352 GNG2-209ENST00000555472 908 ntAPPRIS P1 TSL 3 BASIC19.62■□□□□ 0.73
ALDH1A1P00352 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC19.62■□□□□ 0.73
ALDH1A1P00352 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC19.62■□□□□ 0.73
ALDH1A1P00352 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
ALDH1A1P00352 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
ALDH1A1P00352 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC19.62■□□□□ 0.73
ALDH1A1P00352 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
ALDH1A1P00352 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
ALDH1A1P00352 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
ALDH1A1P00352 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
ALDH1A1P00352 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC19.61■□□□□ 0.73
ALDH1A1P00352 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC19.61■□□□□ 0.73
ALDH1A1P00352 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
ALDH1A1P00352 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
ALDH1A1P00352 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
ALDH1A1P00352 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC19.61■□□□□ 0.73
ALDH1A1P00352 AC017083.2-201ENST00000608069 979 ntBASIC19.61■□□□□ 0.73
ALDH1A1P00352 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
ALDH1A1P00352 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
ALDH1A1P00352 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC19.61■□□□□ 0.73
ALDH1A1P00352 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
ALDH1A1P00352 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
ALDH1A1P00352 AFG3L1P-217ENST00000557444 2447 ntBASIC19.61■□□□□ 0.73
ALDH1A1P00352 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
ALDH1A1P00352 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC19.6■□□□□ 0.73
ALDH1A1P00352 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
ALDH1A1P00352 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
ALDH1A1P00352 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC19.6■□□□□ 0.73
ALDH1A1P00352 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC19.6■□□□□ 0.73
ALDH1A1P00352 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
ALDH1A1P00352 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
ALDH1A1P00352 AL353779.1-201ENST00000434793 351 ntBASIC19.6■□□□□ 0.73
ALDH1A1P00352 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC19.6■□□□□ 0.73
ALDH1A1P00352 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC19.6■□□□□ 0.73
ALDH1A1P00352 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
ALDH1A1P00352 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC19.6■□□□□ 0.73
ALDH1A1P00352 DNAJC19-209ENST00000491873 769 ntTSL 2 BASIC19.6■□□□□ 0.73
ALDH1A1P00352 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC19.6■□□□□ 0.73
ALDH1A1P00352 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC19.6■□□□□ 0.73
ALDH1A1P00352 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC19.6■□□□□ 0.73
ALDH1A1P00352 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC19.6■□□□□ 0.73
ALDH1A1P00352 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
ALDH1A1P00352 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
ALDH1A1P00352 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
ALDH1A1P00352 AC138969.3-201ENST00000546612 1459 ntBASIC19.6■□□□□ 0.73
ALDH1A1P00352 AC138932.2-201ENST00000548268 1459 ntBASIC19.6■□□□□ 0.73
ALDH1A1P00352 AC126755.4-201ENST00000549796 1459 ntBASIC19.6■□□□□ 0.73
ALDH1A1P00352 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC19.6■□□□□ 0.73
ALDH1A1P00352 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC19.6■□□□□ 0.73
ALDH1A1P00352 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
ALDH1A1P00352 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
ALDH1A1P00352 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
ALDH1A1P00352 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC19.59■□□□□ 0.73
ALDH1A1P00352 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC19.59■□□□□ 0.73
ALDH1A1P00352 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
ALDH1A1P00352 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
ALDH1A1P00352 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
ALDH1A1P00352 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
ALDH1A1P00352 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
ALDH1A1P00352 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
ALDH1A1P00352 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
ALDH1A1P00352 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC19.59■□□□□ 0.73
ALDH1A1P00352 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC19.59■□□□□ 0.73
ALDH1A1P00352 AL354710.2-201ENST00000468244 550 ntTSL 4 BASIC19.59■□□□□ 0.73
ALDH1A1P00352 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
ALDH1A1P00352 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC19.59■□□□□ 0.73
ALDH1A1P00352 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC19.59■□□□□ 0.73
ALDH1A1P00352 AC018529.1-201ENST00000613063 361 ntBASIC19.59■□□□□ 0.73
ALDH1A1P00352 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC19.59■□□□□ 0.73
ALDH1A1P00352 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC19.59■□□□□ 0.73
ALDH1A1P00352 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC19.59■□□□□ 0.73
ALDH1A1P00352 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC19.59■□□□□ 0.73
ALDH1A1P00352 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
ALDH1A1P00352 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
ALDH1A1P00352 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
ALDH1A1P00352 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
ALDH1A1P00352 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.73
ALDH1A1P00352 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.73
ALDH1A1P00352 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC19.58■□□□□ 0.73
ALDH1A1P00352 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
ALDH1A1P00352 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
ALDH1A1P00352 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
ALDH1A1P00352 AGTRAP-202ENST00000376627 1055 ntTSL 5 BASIC19.58■□□□□ 0.72
ALDH1A1P00352 HCG4-201ENST00000418983 998 ntBASIC19.58■□□□□ 0.72
ALDH1A1P00352 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC19.58■□□□□ 0.72
ALDH1A1P00352 HLA-V-204ENST00000476601 1289 ntBASIC19.58■□□□□ 0.72
ALDH1A1P00352 GIMAP3P-201ENST00000495150 836 ntBASIC19.58■□□□□ 0.72
ALDH1A1P00352 HILS1-202ENST00000545329 423 ntBASIC19.58■□□□□ 0.72
ALDH1A1P00352 MPI-209ENST00000564003 1195 ntTSL 2 BASIC19.58■□□□□ 0.72
ALDH1A1P00352 AC140912.1-201ENST00000577171 1054 ntBASIC19.58■□□□□ 0.72
ALDH1A1P00352 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms