Protein–RNA interactions for Protein: O95398

RAPGEF3, Rap guanine nucleotide exchange factor 3, humanhuman

Predictions only

Length 923 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3O95398 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
RAPGEF3O95398 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC25.68■■□□□ 1.7
RAPGEF3O95398 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
RAPGEF3O95398 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
RAPGEF3O95398 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
RAPGEF3O95398 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC25.68■■□□□ 1.7
RAPGEF3O95398 AC016027.1-202ENST00000607927 1699 ntBASIC25.68■■□□□ 1.7
RAPGEF3O95398 GRAMD4P3-201ENST00000621665 1669 ntBASIC25.68■■□□□ 1.7
RAPGEF3O95398 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
RAPGEF3O95398 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC25.67■■□□□ 1.7
RAPGEF3O95398 SPAG11A-201ENST00000326558 612 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
RAPGEF3O95398 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
RAPGEF3O95398 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC25.67■■□□□ 1.7
RAPGEF3O95398 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC25.67■■□□□ 1.7
RAPGEF3O95398 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
RAPGEF3O95398 Z94721.1-201ENST00000444102 385 ntTSL 5 BASIC25.67■■□□□ 1.7
RAPGEF3O95398 GNAQP1-201ENST00000444815 1067 ntBASIC25.67■■□□□ 1.7
RAPGEF3O95398 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
RAPGEF3O95398 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
RAPGEF3O95398 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC25.67■■□□□ 1.7
RAPGEF3O95398 RNA5-8SN1-201ENST00000610460 153 ntBASIC25.67■■□□□ 1.7
RAPGEF3O95398 RNA5-8SN5-202ENST00000612463 153 ntBASIC25.67■■□□□ 1.7
RAPGEF3O95398 RNA5-8SN4-201ENST00000613359 153 ntBASIC25.67■■□□□ 1.7
RAPGEF3O95398 AP3S2-216ENST00000617003 1561 ntBASIC25.67■■□□□ 1.7
RAPGEF3O95398 RNA5-8SN5-201ENST00000619471 153 ntBASIC25.67■■□□□ 1.7
RAPGEF3O95398 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC25.67■■□□□ 1.7
RAPGEF3O95398 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
RAPGEF3O95398 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
RAPGEF3O95398 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC25.66■■□□□ 1.7
RAPGEF3O95398 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC25.66■■□□□ 1.7
RAPGEF3O95398 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC25.66■■□□□ 1.7
RAPGEF3O95398 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
RAPGEF3O95398 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
RAPGEF3O95398 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
RAPGEF3O95398 CLCN6-207ENST00000376497 814 ntTSL 3 BASIC25.66■■□□□ 1.7
RAPGEF3O95398 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
RAPGEF3O95398 RNU1-129P-201ENST00000384064 167 ntBASIC25.66■■□□□ 1.7
RAPGEF3O95398 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC25.66■■□□□ 1.7
RAPGEF3O95398 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC25.66■■□□□ 1.7
RAPGEF3O95398 RN7SL752P-201ENST00000463779 287 ntBASIC25.66■■□□□ 1.7
RAPGEF3O95398 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC25.66■■□□□ 1.7
RAPGEF3O95398 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC25.66■■□□□ 1.7
RAPGEF3O95398 U1.21-201ENST00000580816 167 ntBASIC25.66■■□□□ 1.7
RAPGEF3O95398 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC25.66■■□□□ 1.7
RAPGEF3O95398 AC244517.11-204ENST00000624424 760 ntTSL 5 BASIC25.66■■□□□ 1.7
RAPGEF3O95398 AL033527.4-201ENST00000641026 673 ntBASIC25.66■■□□□ 1.7
RAPGEF3O95398 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
RAPGEF3O95398 NARF-206ENST00000457415 1668 ntTSL 5 BASIC25.66■■□□□ 1.7
RAPGEF3O95398 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC25.66■■□□□ 1.7
RAPGEF3O95398 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
RAPGEF3O95398 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC25.66■■□□□ 1.7
RAPGEF3O95398 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
RAPGEF3O95398 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
RAPGEF3O95398 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
RAPGEF3O95398 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC25.65■■□□□ 1.7
RAPGEF3O95398 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC25.65■■□□□ 1.7
RAPGEF3O95398 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
RAPGEF3O95398 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
RAPGEF3O95398 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
RAPGEF3O95398 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
RAPGEF3O95398 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC25.65■■□□□ 1.7
RAPGEF3O95398 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC25.65■■□□□ 1.7
RAPGEF3O95398 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
RAPGEF3O95398 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC25.65■■□□□ 1.7
RAPGEF3O95398 ROPN1-207ENST00000484329 566 ntTSL 3 BASIC25.65■■□□□ 1.7
RAPGEF3O95398 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC25.65■■□□□ 1.7
RAPGEF3O95398 WASH4P-201ENST00000564273 1246 ntBASIC25.65■■□□□ 1.7
RAPGEF3O95398 FAM192A-212ENST00000566077 1066 ntTSL 3 BASIC25.65■■□□□ 1.7
RAPGEF3O95398 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
RAPGEF3O95398 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
RAPGEF3O95398 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
RAPGEF3O95398 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
RAPGEF3O95398 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
RAPGEF3O95398 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
RAPGEF3O95398 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC25.65■■□□□ 1.7
RAPGEF3O95398 AP000997.3-201ENST00000623333 2250 ntBASIC25.65■■□□□ 1.7
RAPGEF3O95398 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC25.65■■□□□ 1.7
RAPGEF3O95398 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC25.65■■□□□ 1.7
RAPGEF3O95398 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC25.64■■□□□ 1.7
RAPGEF3O95398 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC25.64■■□□□ 1.7
RAPGEF3O95398 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC25.64■■□□□ 1.7
RAPGEF3O95398 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
RAPGEF3O95398 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
RAPGEF3O95398 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC25.64■■□□□ 1.7
RAPGEF3O95398 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
RAPGEF3O95398 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
RAPGEF3O95398 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC25.64■■□□□ 1.7
RAPGEF3O95398 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC25.64■■□□□ 1.7
RAPGEF3O95398 ATP5J-205ENST00000400094 589 ntAPPRIS P1 TSL 2 BASIC25.64■■□□□ 1.7
RAPGEF3O95398 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC25.64■■□□□ 1.7
RAPGEF3O95398 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC25.64■■□□□ 1.7
RAPGEF3O95398 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC25.64■■□□□ 1.7
RAPGEF3O95398 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC25.64■■□□□ 1.7
RAPGEF3O95398 AC106886.1-201ENST00000568660 600 ntBASIC25.64■■□□□ 1.7
RAPGEF3O95398 PRR29-204ENST00000577953 565 ntTSL 4 BASIC25.64■■□□□ 1.7
RAPGEF3O95398 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC25.64■■□□□ 1.7
RAPGEF3O95398 TEX28P1-201ENST00000613479 1221 ntBASIC25.64■■□□□ 1.7
RAPGEF3O95398 TEX28P2-201ENST00000617764 1221 ntBASIC25.64■■□□□ 1.7
RAPGEF3O95398 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC25.64■■□□□ 1.7
RAPGEF3O95398 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC25.64■■□□□ 1.69
Retrieved 100 of 98,524 protein–RNA pairs in 43.5 ms