Protein–RNA interactions for Protein: O75382

TRIM3, Tripartite motif-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3O75382 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC16.24■□□□□ 0.19
TRIM3O75382 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC16.24■□□□□ 0.19
TRIM3O75382 COX5A-204ENST00000567270 579 ntTSL 3 BASIC16.24■□□□□ 0.19
TRIM3O75382 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC16.24■□□□□ 0.19
TRIM3O75382 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
TRIM3O75382 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TRIM3O75382 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC16.24■□□□□ 0.19
TRIM3O75382 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC16.24■□□□□ 0.19
TRIM3O75382 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
TRIM3O75382 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TRIM3O75382 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
TRIM3O75382 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
TRIM3O75382 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC16.24■□□□□ 0.19
TRIM3O75382 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC16.24■□□□□ 0.19
TRIM3O75382 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
TRIM3O75382 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC16.24■□□□□ 0.19
TRIM3O75382 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TRIM3O75382 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
TRIM3O75382 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TRIM3O75382 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TRIM3O75382 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC16.23■□□□□ 0.19
TRIM3O75382 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
TRIM3O75382 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
TRIM3O75382 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
TRIM3O75382 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TRIM3O75382 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC16.23■□□□□ 0.19
TRIM3O75382 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TRIM3O75382 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TRIM3O75382 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
TRIM3O75382 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC16.23■□□□□ 0.19
TRIM3O75382 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC16.23■□□□□ 0.19
TRIM3O75382 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TRIM3O75382 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC16.23■□□□□ 0.19
TRIM3O75382 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC16.23■□□□□ 0.19
TRIM3O75382 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
TRIM3O75382 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC16.23■□□□□ 0.19
TRIM3O75382 AKR1C7P-201ENST00000305623 895 ntBASIC16.23■□□□□ 0.19
TRIM3O75382 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
TRIM3O75382 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TRIM3O75382 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC16.23■□□□□ 0.19
TRIM3O75382 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC16.23■□□□□ 0.19
TRIM3O75382 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
TRIM3O75382 AC007967.3-201ENST00000434308 558 ntBASIC16.23■□□□□ 0.19
TRIM3O75382 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC16.23■□□□□ 0.19
TRIM3O75382 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC16.23■□□□□ 0.19
TRIM3O75382 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC16.23■□□□□ 0.19
TRIM3O75382 BMF-207ENST00000559701 630 ntTSL 3 BASIC16.23■□□□□ 0.19
TRIM3O75382 REXO1L6P-202ENST00000619970 1078 ntBASIC16.23■□□□□ 0.19
TRIM3O75382 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC16.23■□□□□ 0.19
TRIM3O75382 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TRIM3O75382 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC16.23■□□□□ 0.19
TRIM3O75382 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
TRIM3O75382 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
TRIM3O75382 KRT18P55-202ENST00000578578 1546 ntBASIC16.23■□□□□ 0.19
TRIM3O75382 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC16.23■□□□□ 0.19
TRIM3O75382 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
TRIM3O75382 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC16.23■□□□□ 0.19
TRIM3O75382 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TRIM3O75382 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TRIM3O75382 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC16.23■□□□□ 0.19
TRIM3O75382 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC16.23■□□□□ 0.19
TRIM3O75382 MST1L-201ENST00000442552 2185 ntBASIC16.23■□□□□ 0.19
TRIM3O75382 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TRIM3O75382 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TRIM3O75382 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
TRIM3O75382 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
TRIM3O75382 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC16.22■□□□□ 0.19
TRIM3O75382 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC16.22■□□□□ 0.19
TRIM3O75382 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
TRIM3O75382 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
TRIM3O75382 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
TRIM3O75382 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
TRIM3O75382 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
TRIM3O75382 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
TRIM3O75382 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
TRIM3O75382 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC16.22■□□□□ 0.19
TRIM3O75382 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TRIM3O75382 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
TRIM3O75382 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TRIM3O75382 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TRIM3O75382 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TRIM3O75382 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC16.22■□□□□ 0.19
TRIM3O75382 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC16.22■□□□□ 0.19
TRIM3O75382 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TRIM3O75382 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC16.22■□□□□ 0.19
TRIM3O75382 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC16.22■□□□□ 0.19
TRIM3O75382 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC16.22■□□□□ 0.19
TRIM3O75382 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TRIM3O75382 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC16.22■□□□□ 0.19
TRIM3O75382 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC16.22■□□□□ 0.19
TRIM3O75382 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC16.22■□□□□ 0.19
TRIM3O75382 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TRIM3O75382 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC16.22■□□□□ 0.19
TRIM3O75382 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
TRIM3O75382 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
TRIM3O75382 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TRIM3O75382 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TRIM3O75382 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
TRIM3O75382 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
TRIM3O75382 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 55.6 ms