Protein–RNA interactions for Protein: O43541

SMAD6, Mothers against decapentaplegic homolog 6, humanhuman

Known RBP Predictions only

Length 496 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6O43541 AC007967.2-201ENST00000432613 625 ntBASIC17.5■□□□□ 0.39
SMAD6O43541 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC17.5■□□□□ 0.39
SMAD6O43541 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC17.5■□□□□ 0.39
SMAD6O43541 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC17.5■□□□□ 0.39
SMAD6O43541 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
SMAD6O43541 AC027601.4-201ENST00000611259 610 ntBASIC17.5■□□□□ 0.39
SMAD6O43541 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC17.5■□□□□ 0.39
SMAD6O43541 AC004790.2-201ENST00000623588 572 ntBASIC17.5■□□□□ 0.39
SMAD6O43541 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
SMAD6O43541 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
SMAD6O43541 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
SMAD6O43541 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
SMAD6O43541 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SMAD6O43541 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
SMAD6O43541 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
SMAD6O43541 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SMAD6O43541 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SMAD6O43541 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
SMAD6O43541 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SMAD6O43541 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SMAD6O43541 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
SMAD6O43541 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
SMAD6O43541 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC17.49■□□□□ 0.39
SMAD6O43541 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC17.49■□□□□ 0.39
SMAD6O43541 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
SMAD6O43541 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC17.49■□□□□ 0.39
SMAD6O43541 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC17.49■□□□□ 0.39
SMAD6O43541 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
SMAD6O43541 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
SMAD6O43541 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
SMAD6O43541 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC17.49■□□□□ 0.39
SMAD6O43541 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
SMAD6O43541 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC17.49■□□□□ 0.39
SMAD6O43541 AP002414.1-201ENST00000391405 1147 ntBASIC17.49■□□□□ 0.39
SMAD6O43541 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC17.49■□□□□ 0.39
SMAD6O43541 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
SMAD6O43541 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC17.49■□□□□ 0.39
SMAD6O43541 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SMAD6O43541 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SMAD6O43541 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SMAD6O43541 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
SMAD6O43541 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC17.49■□□□□ 0.39
SMAD6O43541 AC005332.8-201ENST00000622750 2735 ntBASIC17.49■□□□□ 0.39
SMAD6O43541 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SMAD6O43541 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
SMAD6O43541 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SMAD6O43541 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
SMAD6O43541 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
SMAD6O43541 PI4KAP1-204ENST00000612579 1703 ntBASIC17.48■□□□□ 0.39
SMAD6O43541 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC17.48■□□□□ 0.39
SMAD6O43541 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC17.48■□□□□ 0.39
SMAD6O43541 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC17.48■□□□□ 0.39
SMAD6O43541 MED15P5-201ENST00000423150 992 ntBASIC17.48■□□□□ 0.39
SMAD6O43541 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC17.48■□□□□ 0.39
SMAD6O43541 CIPC-205ENST00000555437 566 ntTSL 3 BASIC17.48■□□□□ 0.39
SMAD6O43541 RIN3-211ENST00000557762 517 ntTSL 3 BASIC17.48■□□□□ 0.39
SMAD6O43541 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC17.48■□□□□ 0.39
SMAD6O43541 TERC-201ENST00000602385 541 ntBASIC17.48■□□□□ 0.39
SMAD6O43541 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC17.48■□□□□ 0.39
SMAD6O43541 CAND2-206ENST00000626378 333 ntTSL 5 BASIC17.48■□□□□ 0.39
SMAD6O43541 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC17.48■□□□□ 0.39
SMAD6O43541 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SMAD6O43541 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
SMAD6O43541 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
SMAD6O43541 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
SMAD6O43541 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SMAD6O43541 CROCCP2-202ENST00000412962 2773 ntBASIC17.48■□□□□ 0.39
SMAD6O43541 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
SMAD6O43541 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SMAD6O43541 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
SMAD6O43541 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
SMAD6O43541 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
SMAD6O43541 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SMAD6O43541 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
SMAD6O43541 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC17.47■□□□□ 0.39
SMAD6O43541 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SMAD6O43541 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SMAD6O43541 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SMAD6O43541 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC17.47■□□□□ 0.39
SMAD6O43541 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
SMAD6O43541 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SMAD6O43541 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
SMAD6O43541 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
SMAD6O43541 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
SMAD6O43541 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC17.47■□□□□ 0.39
SMAD6O43541 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SMAD6O43541 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SMAD6O43541 SLC25A1P3-201ENST00000395415 828 ntBASIC17.47■□□□□ 0.39
SMAD6O43541 FABP5-202ENST00000396359 986 ntTSL 5 BASIC17.47■□□□□ 0.39
SMAD6O43541 CRCP-205ENST00000431089 942 ntTSL 2 BASIC17.47■□□□□ 0.39
SMAD6O43541 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
SMAD6O43541 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC17.47■□□□□ 0.39
SMAD6O43541 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC17.47■□□□□ 0.39
SMAD6O43541 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC17.47■□□□□ 0.39
SMAD6O43541 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC17.47■□□□□ 0.39
SMAD6O43541 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC17.47■□□□□ 0.39
SMAD6O43541 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
SMAD6O43541 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
SMAD6O43541 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SMAD6O43541 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms