Protein–RNA interactions for Protein: Q9Y6Z2

LINC01558, Uncharacterized protein encoded by LINC01558, humanhuman

Predictions only

Length 57 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01558Q9Y6Z2 UCKL1-AS1-201ENST00000623569 3602 ntBASIC8.97□□□□□ -0.97
LINC01558Q9Y6Z2 ANO6-202ENST00000423947 5504 ntAPPRIS ALT2 TSL 1 (best) BASIC8.97□□□□□ -0.97
LINC01558Q9Y6Z2 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
LINC01558Q9Y6Z2 FUBP1-203ENST00000370768 2378 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
LINC01558Q9Y6Z2 SPRY4-202ENST00000434127 2379 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
LINC01558Q9Y6Z2 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC8.97□□□□□ -0.97
LINC01558Q9Y6Z2 WDR59-201ENST00000262144 5898 ntAPPRIS P1 TSL 5 BASIC8.97□□□□□ -0.97
LINC01558Q9Y6Z2 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC8.96□□□□□ -0.97
LINC01558Q9Y6Z2 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.97
LINC01558Q9Y6Z2 ATCAY-201ENST00000450849 5070 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.97
LINC01558Q9Y6Z2 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.97
LINC01558Q9Y6Z2 WDR27-201ENST00000423258 2465 ntAPPRIS ALT2 TSL 1 (best) BASIC8.96□□□□□ -0.97
LINC01558Q9Y6Z2 GIPC2-201ENST00000370759 3847 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.97
LINC01558Q9Y6Z2 ING5-213ENST00000636051 4199 ntTSL 5 BASIC8.96□□□□□ -0.97
LINC01558Q9Y6Z2 AC006486.2-201ENST00000624246 2199 ntBASIC8.96□□□□□ -0.97
LINC01558Q9Y6Z2 ABCG4-205ENST00000619701 3852 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.97
LINC01558Q9Y6Z2 ZNF618-207ENST00000615615 9289 ntAPPRIS ALT2 TSL 1 (best) BASIC8.96□□□□□ -0.97
LINC01558Q9Y6Z2 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC8.96□□□□□ -0.97
LINC01558Q9Y6Z2 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC8.96□□□□□ -0.97
LINC01558Q9Y6Z2 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.97
LINC01558Q9Y6Z2 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC8.96□□□□□ -0.97
LINC01558Q9Y6Z2 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC8.96□□□□□ -0.97
LINC01558Q9Y6Z2 SYT6-210ENST00000641643 1587 ntBASIC8.96□□□□□ -0.97
LINC01558Q9Y6Z2 KCND3-201ENST00000302127 2659 ntAPPRIS ALT1 TSL 5 BASIC8.96□□□□□ -0.97
LINC01558Q9Y6Z2 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.97
LINC01558Q9Y6Z2 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC8.96□□□□□ -0.98
LINC01558Q9Y6Z2 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC8.96□□□□□ -0.98
LINC01558Q9Y6Z2 CYTH3-201ENST00000350796 4505 ntAPPRIS P2 TSL 1 (best) BASIC8.96□□□□□ -0.98
LINC01558Q9Y6Z2 PDPR-202ENST00000398122 2734 ntTSL 2 BASIC8.96□□□□□ -0.98
LINC01558Q9Y6Z2 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC8.96□□□□□ -0.98
LINC01558Q9Y6Z2 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.98
LINC01558Q9Y6Z2 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC8.96□□□□□ -0.98
LINC01558Q9Y6Z2 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC8.96□□□□□ -0.98
LINC01558Q9Y6Z2 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC8.96□□□□□ -0.98
LINC01558Q9Y6Z2 ALDH3A2-226ENST00000631291 3822 ntTSL 5 BASIC8.96□□□□□ -0.98
LINC01558Q9Y6Z2 ECE1-201ENST00000264205 2381 ntAPPRIS P4 TSL 1 (best) BASIC8.96□□□□□ -0.98
LINC01558Q9Y6Z2 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC8.96□□□□□ -0.98
LINC01558Q9Y6Z2 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC8.96□□□□□ -0.98
LINC01558Q9Y6Z2 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC8.96□□□□□ -0.98
LINC01558Q9Y6Z2 TBC1D24-207ENST00000627285 4382 ntAPPRIS P3 TSL 5 BASIC8.96□□□□□ -0.98
LINC01558Q9Y6Z2 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.98
LINC01558Q9Y6Z2 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC8.96□□□□□ -0.98
LINC01558Q9Y6Z2 CSNK1A1P1-201ENST00000430593 2147 ntTSL 1 (best) BASIC8.96□□□□□ -0.98
LINC01558Q9Y6Z2 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.98
LINC01558Q9Y6Z2 ITPRIPL2-201ENST00000381440 7247 ntAPPRIS P1 BASIC8.96□□□□□ -0.98
LINC01558Q9Y6Z2 CYP1B1-AS1-201ENST00000413828 1781 ntTSL 5 BASIC8.96□□□□□ -0.98
LINC01558Q9Y6Z2 RSPH6A-203ENST00000600188 1751 ntAPPRIS ALT2 TSL 2 BASIC8.96□□□□□ -0.98
LINC01558Q9Y6Z2 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC8.96□□□□□ -0.98
LINC01558Q9Y6Z2 ST20-AS1-201ENST00000560255 4223 ntBASIC8.96□□□□□ -0.98
LINC01558Q9Y6Z2 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC8.96□□□□□ -0.98
LINC01558Q9Y6Z2 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC8.96□□□□□ -0.98
LINC01558Q9Y6Z2 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC8.96□□□□□ -0.98
LINC01558Q9Y6Z2 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC8.96□□□□□ -0.98
LINC01558Q9Y6Z2 RAB37-206ENST00000392615 2655 ntTSL 3 BASIC8.96□□□□□ -0.98
LINC01558Q9Y6Z2 SRC-202ENST00000373558 4304 ntTSL 5 BASIC8.96□□□□□ -0.98
LINC01558Q9Y6Z2 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.98
LINC01558Q9Y6Z2 MYADM-205ENST00000391771 3111 ntAPPRIS P1 TSL 2 BASIC8.96□□□□□ -0.98
LINC01558Q9Y6Z2 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC8.96□□□□□ -0.98
LINC01558Q9Y6Z2 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC8.96□□□□□ -0.98
LINC01558Q9Y6Z2 SPAG9-222ENST00000618113 8246 ntAPPRIS ALT1 TSL 5 BASIC8.96□□□□□ -0.98
LINC01558Q9Y6Z2 APBB1IP-202ENST00000376236 2771 ntAPPRIS P1 TSL 5 BASIC8.95□□□□□ -0.98
LINC01558Q9Y6Z2 JARID2-201ENST00000341776 5755 ntAPPRIS P3 TSL 1 (best) BASIC8.95□□□□□ -0.98
LINC01558Q9Y6Z2 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC8.95□□□□□ -0.98
LINC01558Q9Y6Z2 TRPV4-201ENST00000261740 3233 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
LINC01558Q9Y6Z2 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
LINC01558Q9Y6Z2 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC8.95□□□□□ -0.98
LINC01558Q9Y6Z2 CD6-201ENST00000313421 3252 ntAPPRIS P3 TSL 1 (best) BASIC8.95□□□□□ -0.98
LINC01558Q9Y6Z2 NUTM2A-202ENST00000381707 3290 ntAPPRIS P2 TSL 1 (best) BASIC8.95□□□□□ -0.98
LINC01558Q9Y6Z2 NUTM2B-203ENST00000429828 3292 ntAPPRIS P2 TSL 5 BASIC8.95□□□□□ -0.98
LINC01558Q9Y6Z2 NUTM2E-201ENST00000429984 3292 ntAPPRIS P5 TSL 5 BASIC8.95□□□□□ -0.98
LINC01558Q9Y6Z2 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC8.95□□□□□ -0.98
LINC01558Q9Y6Z2 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
LINC01558Q9Y6Z2 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC8.95□□□□□ -0.98
LINC01558Q9Y6Z2 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC8.95□□□□□ -0.98
LINC01558Q9Y6Z2 GPR137C-201ENST00000321662 3888 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
LINC01558Q9Y6Z2 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC8.95□□□□□ -0.98
LINC01558Q9Y6Z2 AP000550.1-201ENST00000420508 4833 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
LINC01558Q9Y6Z2 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
LINC01558Q9Y6Z2 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC8.95□□□□□ -0.98
LINC01558Q9Y6Z2 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC8.95□□□□□ -0.98
LINC01558Q9Y6Z2 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC8.95□□□□□ -0.98
LINC01558Q9Y6Z2 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC8.95□□□□□ -0.98
LINC01558Q9Y6Z2 GAP43-201ENST00000305124 1691 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
LINC01558Q9Y6Z2 SLC34A2-203ENST00000504570 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC8.95□□□□□ -0.98
LINC01558Q9Y6Z2 GDPD2-204ENST00000536730 2171 ntTSL 2 BASIC8.95□□□□□ -0.98
LINC01558Q9Y6Z2 PDE7A-203ENST00000401827 3673 ntAPPRIS ALT1 TSL 1 (best) BASIC8.95□□□□□ -0.98
LINC01558Q9Y6Z2 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC8.95□□□□□ -0.98
LINC01558Q9Y6Z2 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC8.95□□□□□ -0.98
LINC01558Q9Y6Z2 ACAN-209ENST00000617301 8669 ntAPPRIS ALT2 TSL 5 BASIC8.95□□□□□ -0.98
LINC01558Q9Y6Z2 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
LINC01558Q9Y6Z2 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC8.95□□□□□ -0.98
LINC01558Q9Y6Z2 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC8.95□□□□□ -0.98
LINC01558Q9Y6Z2 FURIN-207ENST00000618099 4345 ntAPPRIS P1 TSL 5 BASIC8.95□□□□□ -0.98
LINC01558Q9Y6Z2 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
LINC01558Q9Y6Z2 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC8.95□□□□□ -0.98
LINC01558Q9Y6Z2 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC8.95□□□□□ -0.98
LINC01558Q9Y6Z2 HES4-202ENST00000428771 1040 ntTSL 2 BASIC8.95□□□□□ -0.98
LINC01558Q9Y6Z2 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC8.95□□□□□ -0.98
LINC01558Q9Y6Z2 NME1-207ENST00000480143 964 ntTSL 2 BASIC8.95□□□□□ -0.98
LINC01558Q9Y6Z2 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
Retrieved 100 of 98,524 protein–RNA pairs in 35.1 ms