Protein–RNA interactions for Protein: Q9BSR8

YIPF4, Protein YIPF4, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF4Q9BSR8 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
YIPF4Q9BSR8 AC022211.2-201ENST00000585075 2527 ntBASIC16.39■□□□□ 0.21
YIPF4Q9BSR8 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
YIPF4Q9BSR8 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
YIPF4Q9BSR8 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
YIPF4Q9BSR8 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
YIPF4Q9BSR8 AC026396.1-201ENST00000419388 421 ntBASIC16.39■□□□□ 0.21
YIPF4Q9BSR8 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC16.39■□□□□ 0.21
YIPF4Q9BSR8 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC16.39■□□□□ 0.21
YIPF4Q9BSR8 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC16.39■□□□□ 0.21
YIPF4Q9BSR8 AL353801.3-201ENST00000609898 542 ntBASIC16.39■□□□□ 0.21
YIPF4Q9BSR8 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
YIPF4Q9BSR8 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC16.39■□□□□ 0.21
YIPF4Q9BSR8 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC16.39■□□□□ 0.21
YIPF4Q9BSR8 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC16.39■□□□□ 0.21
YIPF4Q9BSR8 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC16.39■□□□□ 0.21
YIPF4Q9BSR8 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
YIPF4Q9BSR8 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
YIPF4Q9BSR8 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
YIPF4Q9BSR8 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
YIPF4Q9BSR8 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
YIPF4Q9BSR8 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC16.38■□□□□ 0.21
YIPF4Q9BSR8 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
YIPF4Q9BSR8 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
YIPF4Q9BSR8 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
YIPF4Q9BSR8 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
YIPF4Q9BSR8 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
YIPF4Q9BSR8 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
YIPF4Q9BSR8 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
YIPF4Q9BSR8 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
YIPF4Q9BSR8 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
YIPF4Q9BSR8 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
YIPF4Q9BSR8 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
YIPF4Q9BSR8 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC16.38■□□□□ 0.21
YIPF4Q9BSR8 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
YIPF4Q9BSR8 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
YIPF4Q9BSR8 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC16.38■□□□□ 0.21
YIPF4Q9BSR8 AP002383.4-201ENST00000442518 975 ntBASIC16.38■□□□□ 0.21
YIPF4Q9BSR8 MEG3-211ENST00000452514 461 ntTSL 3 BASIC16.38■□□□□ 0.21
YIPF4Q9BSR8 ABR-204ENST00000543210 1049 ntTSL 2 BASIC16.38■□□□□ 0.21
YIPF4Q9BSR8 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC16.38■□□□□ 0.21
YIPF4Q9BSR8 ABR-217ENST00000572441 563 ntTSL 4 BASIC16.38■□□□□ 0.21
YIPF4Q9BSR8 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC16.38■□□□□ 0.21
YIPF4Q9BSR8 AP002414.4-201ENST00000589764 1148 ntBASIC16.38■□□□□ 0.21
YIPF4Q9BSR8 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
YIPF4Q9BSR8 AL139327.4-201ENST00000612362 153 ntBASIC16.38■□□□□ 0.21
YIPF4Q9BSR8 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC16.38■□□□□ 0.21
YIPF4Q9BSR8 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC16.38■□□□□ 0.21
YIPF4Q9BSR8 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
YIPF4Q9BSR8 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
YIPF4Q9BSR8 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
YIPF4Q9BSR8 PRORSD1P-202ENST00000563365 2154 ntBASIC16.38■□□□□ 0.21
YIPF4Q9BSR8 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
YIPF4Q9BSR8 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC16.38■□□□□ 0.21
YIPF4Q9BSR8 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC16.38■□□□□ 0.21
YIPF4Q9BSR8 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
YIPF4Q9BSR8 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
YIPF4Q9BSR8 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
YIPF4Q9BSR8 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
YIPF4Q9BSR8 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
YIPF4Q9BSR8 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
YIPF4Q9BSR8 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
YIPF4Q9BSR8 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
YIPF4Q9BSR8 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC16.37■□□□□ 0.21
YIPF4Q9BSR8 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC16.37■□□□□ 0.21
YIPF4Q9BSR8 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
YIPF4Q9BSR8 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC16.37■□□□□ 0.21
YIPF4Q9BSR8 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
YIPF4Q9BSR8 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
YIPF4Q9BSR8 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
YIPF4Q9BSR8 ATP5G2P1-201ENST00000433580 426 ntBASIC16.37■□□□□ 0.21
YIPF4Q9BSR8 VENTXP7-201ENST00000475503 772 ntBASIC16.37■□□□□ 0.21
YIPF4Q9BSR8 PRELID1P1-202ENST00000567272 903 ntBASIC16.37■□□□□ 0.21
YIPF4Q9BSR8 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC16.37■□□□□ 0.21
YIPF4Q9BSR8 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC16.37■□□□□ 0.21
YIPF4Q9BSR8 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC16.37■□□□□ 0.21
YIPF4Q9BSR8 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC16.37■□□□□ 0.21
YIPF4Q9BSR8 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
YIPF4Q9BSR8 NF2-208ENST00000403435 2568 ntTSL 5 BASIC16.37■□□□□ 0.21
YIPF4Q9BSR8 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
YIPF4Q9BSR8 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
YIPF4Q9BSR8 AMT-250ENST00000637682 1823 ntTSL 5 BASIC16.37■□□□□ 0.21
YIPF4Q9BSR8 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
YIPF4Q9BSR8 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
YIPF4Q9BSR8 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
YIPF4Q9BSR8 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
YIPF4Q9BSR8 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC16.37■□□□□ 0.21
YIPF4Q9BSR8 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC16.37■□□□□ 0.21
YIPF4Q9BSR8 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
YIPF4Q9BSR8 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
YIPF4Q9BSR8 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
YIPF4Q9BSR8 AC233702.3-201ENST00000578656 1387 ntBASIC16.37■□□□□ 0.21
YIPF4Q9BSR8 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
YIPF4Q9BSR8 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
YIPF4Q9BSR8 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
YIPF4Q9BSR8 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
YIPF4Q9BSR8 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC16.36■□□□□ 0.21
YIPF4Q9BSR8 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
YIPF4Q9BSR8 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
YIPF4Q9BSR8 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC16.36■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 24.2 ms