Protein–RNA interactions for Protein: Q96F44

TRIM11, E3 ubiquitin-protein ligase TRIM11, humanhuman

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM11Q96F44 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
TRIM11Q96F44 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
TRIM11Q96F44 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
TRIM11Q96F44 KLF4P1-201ENST00000412782 1185 ntBASIC18.39■□□□□ 0.53
TRIM11Q96F44 ISCU-203ENST00000431221 799 ntTSL 2 BASIC18.39■□□□□ 0.53
TRIM11Q96F44 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC18.39■□□□□ 0.53
TRIM11Q96F44 MINOS1P3-201ENST00000457048 203 ntBASIC18.39■□□□□ 0.53
TRIM11Q96F44 TPSP2-201ENST00000561760 610 ntBASIC18.39■□□□□ 0.53
TRIM11Q96F44 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC18.39■□□□□ 0.53
TRIM11Q96F44 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC18.39■□□□□ 0.53
TRIM11Q96F44 AD001527.2-201ENST00000622994 785 ntBASIC18.39■□□□□ 0.53
TRIM11Q96F44 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
TRIM11Q96F44 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
TRIM11Q96F44 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
TRIM11Q96F44 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
TRIM11Q96F44 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
TRIM11Q96F44 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
TRIM11Q96F44 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC18.39■□□□□ 0.53
TRIM11Q96F44 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
TRIM11Q96F44 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC18.39■□□□□ 0.53
TRIM11Q96F44 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
TRIM11Q96F44 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
TRIM11Q96F44 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
TRIM11Q96F44 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC18.39■□□□□ 0.53
TRIM11Q96F44 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
TRIM11Q96F44 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
TRIM11Q96F44 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TRIM11Q96F44 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
TRIM11Q96F44 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TRIM11Q96F44 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC18.38■□□□□ 0.53
TRIM11Q96F44 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
TRIM11Q96F44 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
TRIM11Q96F44 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC18.38■□□□□ 0.53
TRIM11Q96F44 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
TRIM11Q96F44 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
TRIM11Q96F44 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC18.38■□□□□ 0.53
TRIM11Q96F44 KRT17P6-201ENST00000453795 1220 ntBASIC18.38■□□□□ 0.53
TRIM11Q96F44 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC18.38■□□□□ 0.53
TRIM11Q96F44 CDV3-207ENST00000508481 661 ntTSL 3 BASIC18.38■□□□□ 0.53
TRIM11Q96F44 AC124947.2-201ENST00000547118 1133 ntBASIC18.38■□□□□ 0.53
TRIM11Q96F44 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC18.38■□□□□ 0.53
TRIM11Q96F44 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC18.38■□□□□ 0.53
TRIM11Q96F44 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC18.38■□□□□ 0.53
TRIM11Q96F44 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
TRIM11Q96F44 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
TRIM11Q96F44 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC18.38■□□□□ 0.53
TRIM11Q96F44 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC18.38■□□□□ 0.53
TRIM11Q96F44 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC18.38■□□□□ 0.53
TRIM11Q96F44 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
TRIM11Q96F44 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TRIM11Q96F44 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
TRIM11Q96F44 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TRIM11Q96F44 AC060834.1-201ENST00000443027 2032 ntBASIC18.37■□□□□ 0.53
TRIM11Q96F44 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
TRIM11Q96F44 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TRIM11Q96F44 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
TRIM11Q96F44 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
TRIM11Q96F44 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
TRIM11Q96F44 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TRIM11Q96F44 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TRIM11Q96F44 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TRIM11Q96F44 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TRIM11Q96F44 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
TRIM11Q96F44 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC18.37■□□□□ 0.53
TRIM11Q96F44 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC18.37■□□□□ 0.53
TRIM11Q96F44 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TRIM11Q96F44 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC18.37■□□□□ 0.53
TRIM11Q96F44 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC18.37■□□□□ 0.53
TRIM11Q96F44 TOB2P1-201ENST00000469761 992 ntBASIC18.37■□□□□ 0.53
TRIM11Q96F44 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC18.37■□□□□ 0.53
TRIM11Q96F44 AP002414.4-201ENST00000589764 1148 ntBASIC18.37■□□□□ 0.53
TRIM11Q96F44 AP000550.4-202ENST00000639755 178 ntBASIC18.37■□□□□ 0.53
TRIM11Q96F44 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC18.37■□□□□ 0.53
TRIM11Q96F44 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TRIM11Q96F44 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TRIM11Q96F44 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
TRIM11Q96F44 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
TRIM11Q96F44 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC18.37■□□□□ 0.53
TRIM11Q96F44 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TRIM11Q96F44 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
TRIM11Q96F44 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
TRIM11Q96F44 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC18.36■□□□□ 0.53
TRIM11Q96F44 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
TRIM11Q96F44 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
TRIM11Q96F44 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
TRIM11Q96F44 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
TRIM11Q96F44 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
TRIM11Q96F44 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
TRIM11Q96F44 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
TRIM11Q96F44 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
TRIM11Q96F44 NSUN5P1-202ENST00000421140 1535 ntBASIC18.36■□□□□ 0.53
TRIM11Q96F44 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
TRIM11Q96F44 EGFEM1P-202ENST00000431685 1563 ntBASIC18.36■□□□□ 0.53
TRIM11Q96F44 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
TRIM11Q96F44 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
TRIM11Q96F44 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC18.36■□□□□ 0.53
TRIM11Q96F44 AP002383.4-201ENST00000442518 975 ntBASIC18.36■□□□□ 0.53
TRIM11Q96F44 NKTR-203ENST00000442970 646 ntTSL 2 BASIC18.36■□□□□ 0.53
TRIM11Q96F44 NSUN5P2-203ENST00000457352 1529 ntBASIC18.36■□□□□ 0.53
TRIM11Q96F44 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 57.1 ms