Protein–RNA interactions for Protein: Q96D59

RNF183, Probable E3 ubiquitin-protein ligase RNF183, humanhuman

Predictions only

Length 192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF183Q96D59 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
RNF183Q96D59 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
RNF183Q96D59 AL096828.2-201ENST00000567259 1965 ntBASIC12.92□□□□□ -0.34
RNF183Q96D59 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
RNF183Q96D59 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC12.92□□□□□ -0.34
RNF183Q96D59 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
RNF183Q96D59 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
RNF183Q96D59 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
RNF183Q96D59 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
RNF183Q96D59 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
RNF183Q96D59 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
RNF183Q96D59 SP100-208ENST00000427101 1922 ntTSL 2 BASIC12.92□□□□□ -0.34
RNF183Q96D59 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
RNF183Q96D59 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
RNF183Q96D59 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
RNF183Q96D59 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
RNF183Q96D59 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
RNF183Q96D59 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
RNF183Q96D59 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
RNF183Q96D59 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC12.92□□□□□ -0.34
RNF183Q96D59 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
RNF183Q96D59 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
RNF183Q96D59 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
RNF183Q96D59 MED22-202ENST00000371999 987 ntTSL 3 BASIC12.92□□□□□ -0.34
RNF183Q96D59 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
RNF183Q96D59 KRT18P67-201ENST00000432816 1264 ntBASIC12.92□□□□□ -0.34
RNF183Q96D59 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC12.92□□□□□ -0.34
RNF183Q96D59 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC12.92□□□□□ -0.34
RNF183Q96D59 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC12.92□□□□□ -0.34
RNF183Q96D59 MOK-208ENST00000519058 917 ntTSL 2 BASIC12.92□□□□□ -0.34
RNF183Q96D59 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC12.92□□□□□ -0.34
RNF183Q96D59 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC12.92□□□□□ -0.34
RNF183Q96D59 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC12.92□□□□□ -0.34
RNF183Q96D59 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC12.92□□□□□ -0.34
RNF183Q96D59 AP001269.4-201ENST00000609611 512 ntBASIC12.92□□□□□ -0.34
RNF183Q96D59 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
RNF183Q96D59 AL773604.1-201ENST00000617417 272 ntBASIC12.92□□□□□ -0.34
RNF183Q96D59 TP73-AS1-207ENST00000624167 988 ntBASIC12.92□□□□□ -0.34
RNF183Q96D59 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
RNF183Q96D59 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC12.92□□□□□ -0.34
RNF183Q96D59 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
RNF183Q96D59 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
RNF183Q96D59 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC12.92□□□□□ -0.34
RNF183Q96D59 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC12.92□□□□□ -0.34
RNF183Q96D59 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
RNF183Q96D59 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC12.92□□□□□ -0.34
RNF183Q96D59 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
RNF183Q96D59 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
RNF183Q96D59 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
RNF183Q96D59 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
RNF183Q96D59 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
RNF183Q96D59 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
RNF183Q96D59 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
RNF183Q96D59 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
RNF183Q96D59 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
RNF183Q96D59 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC12.92□□□□□ -0.34
RNF183Q96D59 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC12.91□□□□□ -0.34
RNF183Q96D59 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC12.91□□□□□ -0.34
RNF183Q96D59 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
RNF183Q96D59 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
RNF183Q96D59 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
RNF183Q96D59 AC093677.2-201ENST00000600169 1863 ntBASIC12.91□□□□□ -0.34
RNF183Q96D59 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC12.91□□□□□ -0.34
RNF183Q96D59 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC12.91□□□□□ -0.34
RNF183Q96D59 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC12.91□□□□□ -0.34
RNF183Q96D59 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
RNF183Q96D59 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
RNF183Q96D59 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
RNF183Q96D59 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
RNF183Q96D59 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
RNF183Q96D59 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
RNF183Q96D59 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
RNF183Q96D59 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
RNF183Q96D59 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
RNF183Q96D59 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
RNF183Q96D59 SOD2-201ENST00000337404 991 ntTSL 2 BASIC12.91□□□□□ -0.34
RNF183Q96D59 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
RNF183Q96D59 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC12.91□□□□□ -0.34
RNF183Q96D59 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
RNF183Q96D59 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
RNF183Q96D59 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC12.91□□□□□ -0.34
RNF183Q96D59 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC12.91□□□□□ -0.34
RNF183Q96D59 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC12.91□□□□□ -0.34
RNF183Q96D59 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC12.91□□□□□ -0.34
RNF183Q96D59 FGFR3P6-201ENST00000457012 610 ntBASIC12.91□□□□□ -0.34
RNF183Q96D59 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC12.91□□□□□ -0.34
RNF183Q96D59 AC122714.2-201ENST00000502787 707 ntBASIC12.91□□□□□ -0.34
RNF183Q96D59 AC073648.2-201ENST00000510116 352 ntBASIC12.91□□□□□ -0.34
RNF183Q96D59 AC079776.4-201ENST00000511039 504 ntBASIC12.91□□□□□ -0.34
RNF183Q96D59 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC12.91□□□□□ -0.34
RNF183Q96D59 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC12.91□□□□□ -0.34
RNF183Q96D59 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC12.91□□□□□ -0.34
RNF183Q96D59 AP001005.1-201ENST00000571755 1248 ntBASIC12.91□□□□□ -0.34
RNF183Q96D59 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
RNF183Q96D59 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
RNF183Q96D59 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC12.91□□□□□ -0.34
RNF183Q96D59 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
RNF183Q96D59 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC12.91□□□□□ -0.34
RNF183Q96D59 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
RNF183Q96D59 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 69.7 ms