Protein–RNA interactions for Protein: Q92854

SEMA4D, Semaphorin-4D, humanhuman

Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4DQ92854 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC18.68■□□□□ 0.58
SEMA4DQ92854 AC008608.2-201ENST00000606089 416 ntBASIC18.68■□□□□ 0.58
SEMA4DQ92854 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
SEMA4DQ92854 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SEMA4DQ92854 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
SEMA4DQ92854 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
SEMA4DQ92854 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
SEMA4DQ92854 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SEMA4DQ92854 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SEMA4DQ92854 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
SEMA4DQ92854 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SEMA4DQ92854 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC18.68■□□□□ 0.58
SEMA4DQ92854 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SEMA4DQ92854 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SEMA4DQ92854 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC18.68■□□□□ 0.58
SEMA4DQ92854 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SEMA4DQ92854 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
SEMA4DQ92854 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
SEMA4DQ92854 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
SEMA4DQ92854 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SEMA4DQ92854 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SEMA4DQ92854 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC18.67■□□□□ 0.58
SEMA4DQ92854 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC18.67■□□□□ 0.58
SEMA4DQ92854 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
SEMA4DQ92854 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC18.67■□□□□ 0.58
SEMA4DQ92854 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC18.67■□□□□ 0.58
SEMA4DQ92854 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC18.67■□□□□ 0.58
SEMA4DQ92854 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC18.67■□□□□ 0.58
SEMA4DQ92854 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC18.67■□□□□ 0.58
SEMA4DQ92854 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC18.67■□□□□ 0.58
SEMA4DQ92854 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC18.67■□□□□ 0.58
SEMA4DQ92854 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC18.67■□□□□ 0.58
SEMA4DQ92854 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SEMA4DQ92854 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SEMA4DQ92854 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
SEMA4DQ92854 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SEMA4DQ92854 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC18.67■□□□□ 0.58
SEMA4DQ92854 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SEMA4DQ92854 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC18.67■□□□□ 0.58
SEMA4DQ92854 PAN3-AS1-201ENST00000563843 1351 ntBASIC18.67■□□□□ 0.58
SEMA4DQ92854 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC18.66■□□□□ 0.58
SEMA4DQ92854 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SEMA4DQ92854 AL356309.3-201ENST00000624132 1934 ntBASIC18.66■□□□□ 0.58
SEMA4DQ92854 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
SEMA4DQ92854 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SEMA4DQ92854 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
SEMA4DQ92854 AC097637.2-201ENST00000624096 1997 ntBASIC18.66■□□□□ 0.58
SEMA4DQ92854 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SEMA4DQ92854 LINC02012-201ENST00000608206 1725 ntBASIC18.66■□□□□ 0.58
SEMA4DQ92854 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SEMA4DQ92854 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC18.66■□□□□ 0.58
SEMA4DQ92854 AC060834.1-201ENST00000443027 2032 ntBASIC18.66■□□□□ 0.58
SEMA4DQ92854 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
SEMA4DQ92854 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
SEMA4DQ92854 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
SEMA4DQ92854 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
SEMA4DQ92854 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
SEMA4DQ92854 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC18.66■□□□□ 0.58
SEMA4DQ92854 SAPCD2P3-201ENST00000455031 850 ntBASIC18.66■□□□□ 0.58
SEMA4DQ92854 EMBP1-201ENST00000458200 901 ntBASIC18.66■□□□□ 0.58
SEMA4DQ92854 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
SEMA4DQ92854 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC18.66■□□□□ 0.58
SEMA4DQ92854 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SEMA4DQ92854 PAM16-208ENST00000573553 722 ntTSL 2 BASIC18.66■□□□□ 0.58
SEMA4DQ92854 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
SEMA4DQ92854 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
SEMA4DQ92854 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC18.66■□□□□ 0.58
SEMA4DQ92854 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
SEMA4DQ92854 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
SEMA4DQ92854 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SEMA4DQ92854 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
SEMA4DQ92854 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
SEMA4DQ92854 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC18.66■□□□□ 0.58
SEMA4DQ92854 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
SEMA4DQ92854 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
SEMA4DQ92854 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SEMA4DQ92854 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
SEMA4DQ92854 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
SEMA4DQ92854 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SEMA4DQ92854 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC18.65■□□□□ 0.58
SEMA4DQ92854 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC18.65■□□□□ 0.58
SEMA4DQ92854 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
SEMA4DQ92854 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
SEMA4DQ92854 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
SEMA4DQ92854 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC18.65■□□□□ 0.58
SEMA4DQ92854 PRYP5-201ENST00000451909 266 ntBASIC18.65■□□□□ 0.58
SEMA4DQ92854 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
SEMA4DQ92854 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC18.65■□□□□ 0.58
SEMA4DQ92854 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC18.65■□□□□ 0.58
SEMA4DQ92854 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC18.65■□□□□ 0.58
SEMA4DQ92854 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC18.65■□□□□ 0.58
SEMA4DQ92854 AC064862.7-201ENST00000604520 867 ntBASIC18.65■□□□□ 0.58
SEMA4DQ92854 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC18.65■□□□□ 0.58
SEMA4DQ92854 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SEMA4DQ92854 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC18.65■□□□□ 0.58
SEMA4DQ92854 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SEMA4DQ92854 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SEMA4DQ92854 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
SEMA4DQ92854 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC18.65■□□□□ 0.58
SEMA4DQ92854 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 77.8 ms