Protein–RNA interactions for Protein: Q92600

CNOT9, CCR4-NOT transcription complex subunit 9, humanhuman

Known RBP Predictions only

Length 299 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9Q92600 KRT17P6-201ENST00000453795 1220 ntBASIC16.05■□□□□ 0.16
CNOT9Q92600 MINOS1P3-201ENST00000457048 203 ntBASIC16.05■□□□□ 0.16
CNOT9Q92600 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC16.05■□□□□ 0.16
CNOT9Q92600 IL11-204ENST00000590625 1028 ntTSL 2 BASIC16.05■□□□□ 0.16
CNOT9Q92600 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CNOT9Q92600 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
CNOT9Q92600 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
CNOT9Q92600 AC011467.2-201ENST00000598425 242 ntBASIC16.05■□□□□ 0.16
CNOT9Q92600 NPAP1P7-201ENST00000613027 823 ntBASIC16.05■□□□□ 0.16
CNOT9Q92600 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC16.05■□□□□ 0.16
CNOT9Q92600 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CNOT9Q92600 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
CNOT9Q92600 AC084018.2-201ENST00000613093 2607 ntBASIC16.05■□□□□ 0.16
CNOT9Q92600 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CNOT9Q92600 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC16.05■□□□□ 0.16
CNOT9Q92600 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
CNOT9Q92600 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC16.05■□□□□ 0.16
CNOT9Q92600 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC16.05■□□□□ 0.16
CNOT9Q92600 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CNOT9Q92600 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CNOT9Q92600 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC16.05■□□□□ 0.16
CNOT9Q92600 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CNOT9Q92600 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CNOT9Q92600 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CNOT9Q92600 NSUN5P1-202ENST00000421140 1535 ntBASIC16.04■□□□□ 0.16
CNOT9Q92600 NSUN5P2-203ENST00000457352 1529 ntBASIC16.04■□□□□ 0.16
CNOT9Q92600 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CNOT9Q92600 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
CNOT9Q92600 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
CNOT9Q92600 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
CNOT9Q92600 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CNOT9Q92600 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
CNOT9Q92600 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CNOT9Q92600 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
CNOT9Q92600 CCS-201ENST00000310190 942 ntTSL 5 BASIC16.04■□□□□ 0.16
CNOT9Q92600 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC16.04■□□□□ 0.16
CNOT9Q92600 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CNOT9Q92600 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC16.04■□□□□ 0.16
CNOT9Q92600 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CNOT9Q92600 DANCR-204ENST00000444958 709 ntTSL 3 BASIC16.04■□□□□ 0.16
CNOT9Q92600 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC16.04■□□□□ 0.16
CNOT9Q92600 RNF146-204ENST00000476956 884 ntTSL 2 BASIC16.04■□□□□ 0.16
CNOT9Q92600 AC069148.1-201ENST00000608741 768 ntBASIC16.04■□□□□ 0.16
CNOT9Q92600 AC091076.1-201ENST00000610741 619 ntBASIC16.04■□□□□ 0.16
CNOT9Q92600 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC16.04■□□□□ 0.16
CNOT9Q92600 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
CNOT9Q92600 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CNOT9Q92600 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC16.04■□□□□ 0.16
CNOT9Q92600 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
CNOT9Q92600 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
CNOT9Q92600 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CNOT9Q92600 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC16.04■□□□□ 0.16
CNOT9Q92600 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CNOT9Q92600 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
CNOT9Q92600 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC16.03■□□□□ 0.16
CNOT9Q92600 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC16.03■□□□□ 0.16
CNOT9Q92600 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CNOT9Q92600 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
CNOT9Q92600 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC16.03■□□□□ 0.16
CNOT9Q92600 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CNOT9Q92600 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CNOT9Q92600 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CNOT9Q92600 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CNOT9Q92600 AC022211.2-201ENST00000585075 2527 ntBASIC16.03■□□□□ 0.16
CNOT9Q92600 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CNOT9Q92600 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CNOT9Q92600 AC116353.5-201ENST00000638148 1699 ntBASIC16.03■□□□□ 0.16
CNOT9Q92600 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CNOT9Q92600 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CNOT9Q92600 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC16.03■□□□□ 0.16
CNOT9Q92600 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CNOT9Q92600 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC16.03■□□□□ 0.16
CNOT9Q92600 IGHV3-47-201ENST00000425060 335 ntBASIC16.03■□□□□ 0.16
CNOT9Q92600 CDV3-207ENST00000508481 661 ntTSL 3 BASIC16.03■□□□□ 0.16
CNOT9Q92600 AP000867.3-201ENST00000524675 377 ntBASIC16.03■□□□□ 0.16
CNOT9Q92600 AC074051.2-201ENST00000565115 352 ntBASIC16.03■□□□□ 0.16
CNOT9Q92600 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC16.03■□□□□ 0.16
CNOT9Q92600 AC111152.3-201ENST00000569699 673 ntBASIC16.03■□□□□ 0.16
CNOT9Q92600 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC16.03■□□□□ 0.16
CNOT9Q92600 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC16.03■□□□□ 0.16
CNOT9Q92600 BNIP3P18-201ENST00000593976 575 ntBASIC16.03■□□□□ 0.16
CNOT9Q92600 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC16.03■□□□□ 0.16
CNOT9Q92600 AC092119.3-201ENST00000612618 583 ntBASIC16.03■□□□□ 0.16
CNOT9Q92600 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC16.03■□□□□ 0.16
CNOT9Q92600 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
CNOT9Q92600 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CNOT9Q92600 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
CNOT9Q92600 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CNOT9Q92600 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CNOT9Q92600 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC16.03■□□□□ 0.16
CNOT9Q92600 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
CNOT9Q92600 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
CNOT9Q92600 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC16.03■□□□□ 0.16
CNOT9Q92600 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
CNOT9Q92600 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
CNOT9Q92600 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
CNOT9Q92600 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CNOT9Q92600 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC16.02■□□□□ 0.16
CNOT9Q92600 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
CNOT9Q92600 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 77.8 ms