Protein–RNA interactions for Protein: Q92499

DDX1, ATP-dependent RNA helicase DDX1, humanhuman

Known RBP Predictions only

Length 740 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX1Q92499 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC18.5■□□□□ 0.55
DDX1Q92499 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
DDX1Q92499 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
DDX1Q92499 AC148477.5-201ENST00000625164 1645 ntBASIC18.49■□□□□ 0.55
DDX1Q92499 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
DDX1Q92499 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
DDX1Q92499 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
DDX1Q92499 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
DDX1Q92499 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC18.49■□□□□ 0.55
DDX1Q92499 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
DDX1Q92499 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
DDX1Q92499 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC18.49■□□□□ 0.55
DDX1Q92499 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
DDX1Q92499 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
DDX1Q92499 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
DDX1Q92499 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
DDX1Q92499 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
DDX1Q92499 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC18.49■□□□□ 0.55
DDX1Q92499 KLF4P1-201ENST00000412782 1185 ntBASIC18.49■□□□□ 0.55
DDX1Q92499 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC18.49■□□□□ 0.55
DDX1Q92499 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC18.49■□□□□ 0.55
DDX1Q92499 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
DDX1Q92499 PPIE-208ENST00000470213 927 ntTSL 3 BASIC18.49■□□□□ 0.55
DDX1Q92499 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC18.49■□□□□ 0.55
DDX1Q92499 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC18.49■□□□□ 0.55
DDX1Q92499 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
DDX1Q92499 GZMM-202ENST00000592501 941 ntTSL 3 BASIC18.49■□□□□ 0.55
DDX1Q92499 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC18.49■□□□□ 0.55
DDX1Q92499 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
DDX1Q92499 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
DDX1Q92499 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
DDX1Q92499 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
DDX1Q92499 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC18.49■□□□□ 0.55
DDX1Q92499 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
DDX1Q92499 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
DDX1Q92499 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC18.49■□□□□ 0.55
DDX1Q92499 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
DDX1Q92499 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
DDX1Q92499 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
DDX1Q92499 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC18.49■□□□□ 0.55
DDX1Q92499 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC18.49■□□□□ 0.55
DDX1Q92499 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
DDX1Q92499 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC18.49■□□□□ 0.55
DDX1Q92499 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
DDX1Q92499 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
DDX1Q92499 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
DDX1Q92499 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
DDX1Q92499 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC18.48■□□□□ 0.55
DDX1Q92499 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
DDX1Q92499 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
DDX1Q92499 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC18.48■□□□□ 0.55
DDX1Q92499 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC18.48■□□□□ 0.55
DDX1Q92499 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
DDX1Q92499 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
DDX1Q92499 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC18.48■□□□□ 0.55
DDX1Q92499 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC18.48■□□□□ 0.55
DDX1Q92499 NKTR-203ENST00000442970 646 ntTSL 2 BASIC18.48■□□□□ 0.55
DDX1Q92499 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
DDX1Q92499 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC18.48■□□□□ 0.55
DDX1Q92499 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC18.48■□□□□ 0.55
DDX1Q92499 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
DDX1Q92499 IGHV3OR16-7-201ENST00000604106 360 ntBASIC18.48■□□□□ 0.55
DDX1Q92499 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
DDX1Q92499 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC18.48■□□□□ 0.55
DDX1Q92499 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
DDX1Q92499 IL9RP2-201ENST00000423948 1312 ntBASIC18.48■□□□□ 0.55
DDX1Q92499 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
DDX1Q92499 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC18.47■□□□□ 0.55
DDX1Q92499 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
DDX1Q92499 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
DDX1Q92499 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
DDX1Q92499 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC18.47■□□□□ 0.55
DDX1Q92499 NF2-208ENST00000403435 2568 ntTSL 5 BASIC18.47■□□□□ 0.55
DDX1Q92499 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC18.47■□□□□ 0.55
DDX1Q92499 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
DDX1Q92499 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC18.47■□□□□ 0.55
DDX1Q92499 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
DDX1Q92499 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
DDX1Q92499 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC18.47■□□□□ 0.55
DDX1Q92499 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
DDX1Q92499 MED16-201ENST00000269814 1199 ntTSL 5 BASIC18.47■□□□□ 0.55
DDX1Q92499 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
DDX1Q92499 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC18.47■□□□□ 0.55
DDX1Q92499 NUS1P2-201ENST00000417358 873 ntBASIC18.47■□□□□ 0.55
DDX1Q92499 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC18.47■□□□□ 0.55
DDX1Q92499 ABCD1P5-201ENST00000445663 754 ntBASIC18.47■□□□□ 0.55
DDX1Q92499 RBSN-204ENST00000449050 903 ntTSL 2 BASIC18.47■□□□□ 0.55
DDX1Q92499 KRT16P4-201ENST00000453883 522 ntBASIC18.47■□□□□ 0.55
DDX1Q92499 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC18.47■□□□□ 0.55
DDX1Q92499 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC18.47■□□□□ 0.55
DDX1Q92499 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
DDX1Q92499 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
DDX1Q92499 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
DDX1Q92499 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
DDX1Q92499 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC18.47■□□□□ 0.55
DDX1Q92499 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
DDX1Q92499 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
DDX1Q92499 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
DDX1Q92499 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
DDX1Q92499 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC18.47■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 36.6 ms