Protein–RNA interactions for Protein: P68431

HIST1H3A, Histone H3.1, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H3AP68431 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
HIST1H3AP68431 MIR5100-201ENST00000579544 119 ntBASIC15.2■□□□□ 0.02
HIST1H3AP68431 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC15.2■□□□□ 0.02
HIST1H3AP68431 GZMM-202ENST00000592501 941 ntTSL 3 BASIC15.2■□□□□ 0.02
HIST1H3AP68431 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC15.2■□□□□ 0.02
HIST1H3AP68431 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
HIST1H3AP68431 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
HIST1H3AP68431 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
HIST1H3AP68431 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
HIST1H3AP68431 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
HIST1H3AP68431 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC15.2■□□□□ 0.02
HIST1H3AP68431 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
HIST1H3AP68431 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
HIST1H3AP68431 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
HIST1H3AP68431 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
HIST1H3AP68431 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC15.2■□□□□ 0.02
HIST1H3AP68431 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
HIST1H3AP68431 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
HIST1H3AP68431 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
HIST1H3AP68431 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
HIST1H3AP68431 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
HIST1H3AP68431 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
HIST1H3AP68431 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC15.19■□□□□ 0.02
HIST1H3AP68431 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC15.19■□□□□ 0.02
HIST1H3AP68431 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
HIST1H3AP68431 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
HIST1H3AP68431 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
HIST1H3AP68431 SOD2-201ENST00000337404 991 ntTSL 2 BASIC15.19■□□□□ 0.02
HIST1H3AP68431 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC15.19■□□□□ 0.02
HIST1H3AP68431 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
HIST1H3AP68431 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
HIST1H3AP68431 NKTR-203ENST00000442970 646 ntTSL 2 BASIC15.19■□□□□ 0.02
HIST1H3AP68431 SRP19-202ENST00000445150 833 ntTSL 2 BASIC15.19■□□□□ 0.02
HIST1H3AP68431 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC15.19■□□□□ 0.02
HIST1H3AP68431 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC15.19■□□□□ 0.02
HIST1H3AP68431 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
HIST1H3AP68431 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC15.19■□□□□ 0.02
HIST1H3AP68431 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC15.19■□□□□ 0.02
HIST1H3AP68431 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
HIST1H3AP68431 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
HIST1H3AP68431 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC15.19■□□□□ 0.02
HIST1H3AP68431 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
HIST1H3AP68431 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
HIST1H3AP68431 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC15.19■□□□□ 0.02
HIST1H3AP68431 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
HIST1H3AP68431 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
HIST1H3AP68431 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
HIST1H3AP68431 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
HIST1H3AP68431 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
HIST1H3AP68431 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC15.19■□□□□ 0.02
HIST1H3AP68431 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC15.19■□□□□ 0.02
HIST1H3AP68431 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
HIST1H3AP68431 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
HIST1H3AP68431 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
HIST1H3AP68431 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
HIST1H3AP68431 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
HIST1H3AP68431 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC15.19■□□□□ 0.02
HIST1H3AP68431 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
HIST1H3AP68431 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
HIST1H3AP68431 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
HIST1H3AP68431 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC15.18■□□□□ 0.02
HIST1H3AP68431 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
HIST1H3AP68431 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC15.18■□□□□ 0.02
HIST1H3AP68431 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC15.18■□□□□ 0.02
HIST1H3AP68431 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC15.18■□□□□ 0.02
HIST1H3AP68431 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
HIST1H3AP68431 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
HIST1H3AP68431 FUOM-202ENST00000368551 628 ntTSL 3 BASIC15.18■□□□□ 0.02
HIST1H3AP68431 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
HIST1H3AP68431 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC15.18■□□□□ 0.02
HIST1H3AP68431 ABCD1P5-201ENST00000445663 754 ntBASIC15.18■□□□□ 0.02
HIST1H3AP68431 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
HIST1H3AP68431 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC15.18■□□□□ 0.02
HIST1H3AP68431 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC15.18■□□□□ 0.02
HIST1H3AP68431 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC15.18■□□□□ 0.02
HIST1H3AP68431 FICD-205ENST00000552758 603 ntTSL 2 BASIC15.18■□□□□ 0.02
HIST1H3AP68431 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC15.18■□□□□ 0.02
HIST1H3AP68431 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC15.18■□□□□ 0.02
HIST1H3AP68431 AC099336.1-202ENST00000602961 463 ntBASIC15.18■□□□□ 0.02
HIST1H3AP68431 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
HIST1H3AP68431 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
HIST1H3AP68431 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
HIST1H3AP68431 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC15.18■□□□□ 0.02
HIST1H3AP68431 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
HIST1H3AP68431 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
HIST1H3AP68431 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
HIST1H3AP68431 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
HIST1H3AP68431 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
HIST1H3AP68431 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
HIST1H3AP68431 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
HIST1H3AP68431 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
HIST1H3AP68431 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
HIST1H3AP68431 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC15.18■□□□□ 0.02
HIST1H3AP68431 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
HIST1H3AP68431 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
HIST1H3AP68431 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
HIST1H3AP68431 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
HIST1H3AP68431 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC15.17■□□□□ 0.02
HIST1H3AP68431 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
HIST1H3AP68431 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 39.5 ms