Protein–RNA interactions for Protein: P51587

BRCA2, Breast cancer type 2 susceptibility protein, humanhuman

Predictions only

Length 3,418 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2P51587 PTPA-220ENST00000436883 532 ntTSL 4 BASIC19.22■□□□□ 0.67
BRCA2P51587 AL513480.1-201ENST00000451731 511 ntBASIC19.22■□□□□ 0.67
BRCA2P51587 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
BRCA2P51587 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC19.22■□□□□ 0.67
BRCA2P51587 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC19.22■□□□□ 0.67
BRCA2P51587 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC19.22■□□□□ 0.67
BRCA2P51587 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
BRCA2P51587 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
BRCA2P51587 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
BRCA2P51587 AL450998.2-201ENST00000418525 639 ntTSL 3 BASIC19.22■□□□□ 0.67
BRCA2P51587 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC19.22■□□□□ 0.67
BRCA2P51587 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
BRCA2P51587 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC19.22■□□□□ 0.67
BRCA2P51587 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC19.22■□□□□ 0.67
BRCA2P51587 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
BRCA2P51587 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
BRCA2P51587 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC19.22■□□□□ 0.67
BRCA2P51587 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
BRCA2P51587 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
BRCA2P51587 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
BRCA2P51587 PRAF2-201ENST00000376386 801 ntTSL 2 BASIC19.22■□□□□ 0.67
BRCA2P51587 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
BRCA2P51587 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC19.22■□□□□ 0.67
BRCA2P51587 PACS1-203ENST00000524815 628 ntTSL 4 BASIC19.22■□□□□ 0.67
BRCA2P51587 AC109462.3-201ENST00000573934 613 ntBASIC19.22■□□□□ 0.67
BRCA2P51587 SPDYE12P-201ENST00000618416 771 ntBASIC19.22■□□□□ 0.67
BRCA2P51587 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC19.22■□□□□ 0.67
BRCA2P51587 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC19.22■□□□□ 0.67
BRCA2P51587 UXT-AS1-201ENST00000590504 1525 ntBASIC19.22■□□□□ 0.67
BRCA2P51587 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
BRCA2P51587 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC19.21■□□□□ 0.67
BRCA2P51587 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
BRCA2P51587 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC19.21■□□□□ 0.67
BRCA2P51587 MYCLP1-201ENST00000372451 1075 ntBASIC19.21■□□□□ 0.67
BRCA2P51587 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
BRCA2P51587 MIR658-201ENST00000385210 100 ntBASIC19.21■□□□□ 0.67
BRCA2P51587 AC008969.1-205ENST00000553254 876 ntTSL 2 BASIC19.21■□□□□ 0.67
BRCA2P51587 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC19.21■□□□□ 0.67
BRCA2P51587 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
BRCA2P51587 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
BRCA2P51587 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
BRCA2P51587 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC19.21■□□□□ 0.67
BRCA2P51587 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
BRCA2P51587 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
BRCA2P51587 AP000842.3-202ENST00000569238 1080 ntBASIC19.21■□□□□ 0.67
BRCA2P51587 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC19.21■□□□□ 0.67
BRCA2P51587 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
BRCA2P51587 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
BRCA2P51587 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC19.21■□□□□ 0.67
BRCA2P51587 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC19.21■□□□□ 0.67
BRCA2P51587 ATP5J-205ENST00000400094 589 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.66
BRCA2P51587 AC241585.1-201ENST00000433527 519 ntBASIC19.21■□□□□ 0.66
BRCA2P51587 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC19.21■□□□□ 0.66
BRCA2P51587 CD7-202ENST00000578509 925 ntTSL 3 BASIC19.21■□□□□ 0.66
BRCA2P51587 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
BRCA2P51587 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
BRCA2P51587 AKAP8P1-201ENST00000434743 1349 ntBASIC19.2■□□□□ 0.66
BRCA2P51587 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
BRCA2P51587 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
BRCA2P51587 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC19.2■□□□□ 0.66
BRCA2P51587 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC19.2■□□□□ 0.66
BRCA2P51587 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC19.2■□□□□ 0.66
BRCA2P51587 CD164L2-203ENST00000374030 993 ntAPPRIS ALT1 TSL 5 BASIC19.2■□□□□ 0.66
BRCA2P51587 BCYRN1-201ENST00000418539 200 ntBASIC19.2■□□□□ 0.66
BRCA2P51587 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC19.2■□□□□ 0.66
BRCA2P51587 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC19.2■□□□□ 0.66
BRCA2P51587 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC19.2■□□□□ 0.66
BRCA2P51587 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
BRCA2P51587 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC19.2■□□□□ 0.66
BRCA2P51587 C11orf98-201ENST00000524958 654 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
BRCA2P51587 MIR4259-201ENST00000584466 101 ntBASIC19.2■□□□□ 0.66
BRCA2P51587 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC19.2■□□□□ 0.66
BRCA2P51587 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC19.2■□□□□ 0.66
BRCA2P51587 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
BRCA2P51587 AC112492.5-201ENST00000421897 457 ntBASIC19.19■□□□□ 0.66
BRCA2P51587 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC19.19■□□□□ 0.66
BRCA2P51587 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC19.19■□□□□ 0.66
BRCA2P51587 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
BRCA2P51587 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC19.19■□□□□ 0.66
BRCA2P51587 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
BRCA2P51587 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
BRCA2P51587 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
BRCA2P51587 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
BRCA2P51587 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
BRCA2P51587 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC19.19■□□□□ 0.66
BRCA2P51587 AL391650.2-201ENST00000640097 941 ntTSL 5 BASIC19.19■□□□□ 0.66
BRCA2P51587 CROCCP3-202ENST00000420820 1947 ntBASIC19.19■□□□□ 0.66
BRCA2P51587 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
BRCA2P51587 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC19.19■□□□□ 0.66
BRCA2P51587 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
BRCA2P51587 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
BRCA2P51587 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
BRCA2P51587 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
BRCA2P51587 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
BRCA2P51587 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
BRCA2P51587 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC19.19■□□□□ 0.66
BRCA2P51587 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC19.19■□□□□ 0.66
BRCA2P51587 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC19.19■□□□□ 0.66
BRCA2P51587 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC19.19■□□□□ 0.66
BRCA2P51587 ACTG1P4-201ENST00000425123 1122 ntBASIC19.19■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms