Protein–RNA interactions for Protein: P51532

SMARCA4, Transcription activator BRG1, humanhuman

Predictions only

Length 1,647 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4P51532 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC30.68■■■□□ 2.5
SMARCA4P51532 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC30.68■■■□□ 2.5
SMARCA4P51532 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC30.68■■■□□ 2.5
SMARCA4P51532 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC30.68■■■□□ 2.5
SMARCA4P51532 TOMM5-201ENST00000321301 751 ntAPPRIS P1 TSL 1 (best) BASIC30.68■■■□□ 2.5
SMARCA4P51532 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC30.68■■■□□ 2.5
SMARCA4P51532 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC30.68■■■□□ 2.5
SMARCA4P51532 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC30.68■■■□□ 2.5
SMARCA4P51532 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC30.68■■■□□ 2.5
SMARCA4P51532 ZFPL1-207ENST00000526791 384 ntTSL 3 BASIC30.68■■■□□ 2.5
SMARCA4P51532 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC30.68■■■□□ 2.5
SMARCA4P51532 AL008721.1-201ENST00000609964 604 ntBASIC30.68■■■□□ 2.5
SMARCA4P51532 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC30.68■■■□□ 2.5
SMARCA4P51532 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC30.67■■■□□ 2.5
SMARCA4P51532 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC30.67■■■□□ 2.5
SMARCA4P51532 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC30.67■■■□□ 2.5
SMARCA4P51532 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC30.67■■■□□ 2.5
SMARCA4P51532 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC30.67■■■□□ 2.5
SMARCA4P51532 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC30.67■■■□□ 2.5
SMARCA4P51532 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC30.67■■■□□ 2.5
SMARCA4P51532 LRRC30-201ENST00000383467 923 ntAPPRIS P1 BASIC30.67■■■□□ 2.5
SMARCA4P51532 SLC25A1P3-201ENST00000395415 828 ntBASIC30.67■■■□□ 2.5
SMARCA4P51532 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC30.67■■■□□ 2.5
SMARCA4P51532 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC30.67■■■□□ 2.5
SMARCA4P51532 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC30.67■■■□□ 2.5
SMARCA4P51532 CHRNA5-203ENST00000559554 1051 ntTSL 3 BASIC30.67■■■□□ 2.5
SMARCA4P51532 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC30.67■■■□□ 2.5
SMARCA4P51532 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC30.67■■■□□ 2.5
SMARCA4P51532 LINC01451-201ENST00000623792 534 ntBASIC30.67■■■□□ 2.5
SMARCA4P51532 SERF2-217ENST00000630046 862 ntTSL 5 BASIC30.67■■■□□ 2.5
SMARCA4P51532 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC30.67■■■□□ 2.5
SMARCA4P51532 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC30.67■■■□□ 2.5
SMARCA4P51532 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC30.67■■■□□ 2.5
SMARCA4P51532 LYSMD4-203ENST00000378904 2122 ntBASIC30.67■■■□□ 2.5
SMARCA4P51532 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC30.67■■■□□ 2.5
SMARCA4P51532 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC30.66■■■□□ 2.5
SMARCA4P51532 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC30.66■■■□□ 2.5
SMARCA4P51532 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC30.66■■■□□ 2.5
SMARCA4P51532 MRPL36-204ENST00000508987 686 ntAPPRIS P1 TSL 2 BASIC30.66■■■□□ 2.5
SMARCA4P51532 AC091167.2-201ENST00000579581 588 ntBASIC30.66■■■□□ 2.5
SMARCA4P51532 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC30.66■■■□□ 2.5
SMARCA4P51532 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC30.66■■■□□ 2.5
SMARCA4P51532 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC30.66■■■□□ 2.5
SMARCA4P51532 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC30.66■■■□□ 2.5
SMARCA4P51532 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC30.66■■■□□ 2.5
SMARCA4P51532 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC30.66■■■□□ 2.5
SMARCA4P51532 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC30.66■■■□□ 2.5
SMARCA4P51532 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC30.66■■■□□ 2.5
SMARCA4P51532 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC30.66■■■□□ 2.5
SMARCA4P51532 CU639417.3-201ENST00000624240 1404 ntBASIC30.66■■■□□ 2.5
SMARCA4P51532 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC30.66■■■□□ 2.5
SMARCA4P51532 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC30.65■■■□□ 2.5
SMARCA4P51532 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC30.65■■■□□ 2.5
SMARCA4P51532 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC30.65■■■□□ 2.5
SMARCA4P51532 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC30.65■■■□□ 2.5
SMARCA4P51532 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC30.65■■■□□ 2.5
SMARCA4P51532 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC30.65■■■□□ 2.5
SMARCA4P51532 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC30.65■■■□□ 2.5
SMARCA4P51532 AC027307.3-201ENST00000594262 1100 ntBASIC30.65■■■□□ 2.5
SMARCA4P51532 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC30.65■■■□□ 2.5
SMARCA4P51532 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC30.65■■■□□ 2.5
SMARCA4P51532 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC30.65■■■□□ 2.5
SMARCA4P51532 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC30.65■■■□□ 2.5
SMARCA4P51532 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC30.65■■■□□ 2.5
SMARCA4P51532 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC30.65■■■□□ 2.5
SMARCA4P51532 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC30.65■■■□□ 2.5
SMARCA4P51532 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC30.65■■■□□ 2.5
SMARCA4P51532 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC30.65■■■□□ 2.5
SMARCA4P51532 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC30.65■■■□□ 2.5
SMARCA4P51532 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC30.65■■■□□ 2.5
SMARCA4P51532 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC30.65■■■□□ 2.5
SMARCA4P51532 UBE2E3-205ENST00000602475 602 ntTSL 3 BASIC30.65■■■□□ 2.5
SMARCA4P51532 AL844908.2-201ENST00000609461 460 ntBASIC30.65■■■□□ 2.5
SMARCA4P51532 AC004790.1-201ENST00000612686 536 ntBASIC30.65■■■□□ 2.5
SMARCA4P51532 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC30.65■■■□□ 2.5
SMARCA4P51532 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC30.65■■■□□ 2.5
SMARCA4P51532 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC30.64■■■□□ 2.5
SMARCA4P51532 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC30.64■■■□□ 2.5
SMARCA4P51532 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC30.64■■■□□ 2.5
SMARCA4P51532 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC30.64■■■□□ 2.5
SMARCA4P51532 MADD-208ENST00000405573 1823 ntTSL 5 BASIC30.64■■■□□ 2.5
SMARCA4P51532 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC30.64■■■□□ 2.5
SMARCA4P51532 TEX12-201ENST00000280358 1147 ntAPPRIS P1 TSL 1 (best) BASIC30.64■■■□□ 2.5
SMARCA4P51532 AL512638.1-201ENST00000457493 794 ntBASIC30.64■■■□□ 2.5
SMARCA4P51532 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC30.64■■■□□ 2.5
SMARCA4P51532 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC30.64■■■□□ 2.5
SMARCA4P51532 IGHV3-72-202ENST00000621503 303 ntBASIC30.64■■■□□ 2.5
SMARCA4P51532 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC30.64■■■□□ 2.5
SMARCA4P51532 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC30.64■■■□□ 2.5
SMARCA4P51532 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC30.63■■■□□ 2.49
SMARCA4P51532 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC30.63■■■□□ 2.49
SMARCA4P51532 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC30.63■■■□□ 2.49
SMARCA4P51532 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC30.63■■■□□ 2.49
SMARCA4P51532 AC004840.1-201ENST00000636359 365 ntBASIC30.63■■■□□ 2.49
SMARCA4P51532 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC30.63■■■□□ 2.49
SMARCA4P51532 LINC00895-201ENST00000629028 1637 ntBASIC30.63■■■□□ 2.49
SMARCA4P51532 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC30.63■■■□□ 2.49
SMARCA4P51532 ALG5-201ENST00000239891 1154 ntAPPRIS P1 TSL 1 (best) BASIC30.62■■■□□ 2.49
SMARCA4P51532 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC30.62■■■□□ 2.49
SMARCA4P51532 ATP5G2P4-201ENST00000442175 420 ntBASIC30.62■■■□□ 2.49
Retrieved 100 of 98,524 protein–RNA pairs in 47.1 ms