Protein–RNA interactions for Protein: P35900

KRT20, Keratin, type I cytoskeletal 20, humanhuman

Predictions only

Length 424 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT20P35900 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
KRT20P35900 CHCHD2P8-201ENST00000429873 447 ntBASIC16.58■□□□□ 0.24
KRT20P35900 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC16.58■□□□□ 0.24
KRT20P35900 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC16.58■□□□□ 0.24
KRT20P35900 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
KRT20P35900 AC124864.1-201ENST00000623408 392 ntBASIC16.58■□□□□ 0.24
KRT20P35900 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC16.58■□□□□ 0.24
KRT20P35900 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC16.58■□□□□ 0.24
KRT20P35900 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC16.58■□□□□ 0.24
KRT20P35900 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
KRT20P35900 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
KRT20P35900 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
KRT20P35900 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
KRT20P35900 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
KRT20P35900 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
KRT20P35900 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC16.58■□□□□ 0.24
KRT20P35900 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
KRT20P35900 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
KRT20P35900 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
KRT20P35900 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC16.58■□□□□ 0.24
KRT20P35900 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
KRT20P35900 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
KRT20P35900 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC16.58■□□□□ 0.24
KRT20P35900 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
KRT20P35900 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
KRT20P35900 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC16.57■□□□□ 0.24
KRT20P35900 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
KRT20P35900 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
KRT20P35900 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC16.57■□□□□ 0.24
KRT20P35900 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
KRT20P35900 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
KRT20P35900 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
KRT20P35900 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
KRT20P35900 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC16.57■□□□□ 0.24
KRT20P35900 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
KRT20P35900 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
KRT20P35900 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
KRT20P35900 TSSC2-201ENST00000450217 709 ntBASIC16.57■□□□□ 0.24
KRT20P35900 CNP-204ENST00000472031 1019 ntTSL 2 BASIC16.57■□□□□ 0.24
KRT20P35900 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
KRT20P35900 AC011840.4-201ENST00000578471 627 ntBASIC16.57■□□□□ 0.24
KRT20P35900 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
KRT20P35900 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC16.57■□□□□ 0.24
KRT20P35900 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC16.57■□□□□ 0.24
KRT20P35900 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
KRT20P35900 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
KRT20P35900 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
KRT20P35900 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC16.57■□□□□ 0.24
KRT20P35900 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC16.57■□□□□ 0.24
KRT20P35900 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC16.57■□□□□ 0.24
KRT20P35900 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
KRT20P35900 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
KRT20P35900 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
KRT20P35900 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
KRT20P35900 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
KRT20P35900 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC16.57■□□□□ 0.24
KRT20P35900 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
KRT20P35900 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC16.56■□□□□ 0.24
KRT20P35900 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
KRT20P35900 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
KRT20P35900 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC16.56■□□□□ 0.24
KRT20P35900 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC16.56■□□□□ 0.24
KRT20P35900 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
KRT20P35900 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
KRT20P35900 KRT18P1-202ENST00000452408 1331 ntBASIC16.56■□□□□ 0.24
KRT20P35900 AL355312.1-201ENST00000407115 2176 ntBASIC16.56■□□□□ 0.24
KRT20P35900 BOC-212ENST00000485230 2173 ntTSL 2 BASIC16.56■□□□□ 0.24
KRT20P35900 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
KRT20P35900 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
KRT20P35900 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC16.56■□□□□ 0.24
KRT20P35900 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC16.56■□□□□ 0.24
KRT20P35900 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
KRT20P35900 AL592071.1-201ENST00000611956 408 ntBASIC16.56■□□□□ 0.24
KRT20P35900 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
KRT20P35900 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
KRT20P35900 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC16.56■□□□□ 0.24
KRT20P35900 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
KRT20P35900 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
KRT20P35900 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
KRT20P35900 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
KRT20P35900 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC16.56■□□□□ 0.24
KRT20P35900 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
KRT20P35900 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
KRT20P35900 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
KRT20P35900 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
KRT20P35900 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
KRT20P35900 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
KRT20P35900 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
KRT20P35900 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC16.55■□□□□ 0.24
KRT20P35900 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
KRT20P35900 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC16.55■□□□□ 0.24
KRT20P35900 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
KRT20P35900 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
KRT20P35900 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
KRT20P35900 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
KRT20P35900 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
KRT20P35900 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
KRT20P35900 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
KRT20P35900 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
KRT20P35900 MTCL1P1-201ENST00000446207 792 ntBASIC16.55■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 37.2 ms