Protein–RNA interactions for Protein: P13942

COL11A2, Collagen alpha-2(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,736 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A2P13942 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
COL11A2P13942 ELFN1-AS1-202ENST00000453348 637 ntTSL 1 (best) BASIC21■□□□□ 0.95
COL11A2P13942 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC21■□□□□ 0.95
COL11A2P13942 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC21■□□□□ 0.95
COL11A2P13942 MUTYH-237ENST00000531105 501 ntTSL 5 BASIC21■□□□□ 0.95
COL11A2P13942 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC21■□□□□ 0.95
COL11A2P13942 NOP2-220ENST00000545915 630 ntTSL 2 BASIC21■□□□□ 0.95
COL11A2P13942 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC21■□□□□ 0.95
COL11A2P13942 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC21■□□□□ 0.95
COL11A2P13942 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
COL11A2P13942 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC21■□□□□ 0.95
COL11A2P13942 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
COL11A2P13942 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC21■□□□□ 0.95
COL11A2P13942 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
COL11A2P13942 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC21■□□□□ 0.95
COL11A2P13942 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC21■□□□□ 0.95
COL11A2P13942 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
COL11A2P13942 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
COL11A2P13942 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC21■□□□□ 0.95
COL11A2P13942 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC20.99■□□□□ 0.95
COL11A2P13942 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC20.99■□□□□ 0.95
COL11A2P13942 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC20.99■□□□□ 0.95
COL11A2P13942 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
COL11A2P13942 HLA-V-201ENST00000429037 534 ntBASIC20.99■□□□□ 0.95
COL11A2P13942 DICER1-AS1-202ENST00000439819 810 ntTSL 3 BASIC20.99■□□□□ 0.95
COL11A2P13942 ATG10-207ENST00000513443 978 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
COL11A2P13942 MIR4453-201ENST00000584019 89 ntBASIC20.99■□□□□ 0.95
COL11A2P13942 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
COL11A2P13942 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC20.99■□□□□ 0.95
COL11A2P13942 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
COL11A2P13942 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
COL11A2P13942 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC20.99■□□□□ 0.95
COL11A2P13942 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
COL11A2P13942 IGHV3-62-201ENST00000520057 340 ntBASIC20.98■□□□□ 0.95
COL11A2P13942 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC20.98■□□□□ 0.95
COL11A2P13942 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC20.98■□□□□ 0.95
COL11A2P13942 AL132711.1-201ENST00000557546 722 ntTSL 3 BASIC20.98■□□□□ 0.95
COL11A2P13942 AL596325.1-201ENST00000563991 1082 ntBASIC20.98■□□□□ 0.95
COL11A2P13942 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC20.98■□□□□ 0.95
COL11A2P13942 AC004790.1-201ENST00000612686 536 ntBASIC20.98■□□□□ 0.95
COL11A2P13942 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
COL11A2P13942 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC20.98■□□□□ 0.95
COL11A2P13942 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
COL11A2P13942 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC20.98■□□□□ 0.95
COL11A2P13942 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
COL11A2P13942 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
COL11A2P13942 AC142381.1-201ENST00000426099 345 ntBASIC20.98■□□□□ 0.95
COL11A2P13942 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
COL11A2P13942 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
COL11A2P13942 WASH4P-201ENST00000564273 1246 ntBASIC20.98■□□□□ 0.95
COL11A2P13942 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC20.98■□□□□ 0.95
COL11A2P13942 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
COL11A2P13942 AL353732.1-201ENST00000569618 1459 ntBASIC20.98■□□□□ 0.95
COL11A2P13942 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
COL11A2P13942 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC20.97■□□□□ 0.95
COL11A2P13942 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
COL11A2P13942 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC20.97■□□□□ 0.95
COL11A2P13942 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
COL11A2P13942 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
COL11A2P13942 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC20.97■□□□□ 0.95
COL11A2P13942 PODN-203ENST00000395871 2744 ntTSL 5 BASIC20.97■□□□□ 0.95
COL11A2P13942 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC20.97■□□□□ 0.95
COL11A2P13942 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
COL11A2P13942 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
COL11A2P13942 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC20.97■□□□□ 0.95
COL11A2P13942 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC20.97■□□□□ 0.95
COL11A2P13942 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC20.97■□□□□ 0.95
COL11A2P13942 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
COL11A2P13942 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
COL11A2P13942 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
COL11A2P13942 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC20.97■□□□□ 0.95
COL11A2P13942 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC20.97■□□□□ 0.95
COL11A2P13942 AC009118.2-201ENST00000613275 655 ntBASIC20.97■□□□□ 0.95
COL11A2P13942 AL138828.2-201ENST00000615812 383 ntBASIC20.97■□□□□ 0.95
COL11A2P13942 AL590560.3-201ENST00000623350 461 ntBASIC20.97■□□□□ 0.95
COL11A2P13942 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
COL11A2P13942 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC20.97■□□□□ 0.95
COL11A2P13942 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
COL11A2P13942 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
COL11A2P13942 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
COL11A2P13942 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
COL11A2P13942 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC20.97■□□□□ 0.95
COL11A2P13942 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
COL11A2P13942 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
COL11A2P13942 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
COL11A2P13942 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
COL11A2P13942 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
COL11A2P13942 HCG4-201ENST00000418983 998 ntBASIC20.96■□□□□ 0.95
COL11A2P13942 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC20.96■□□□□ 0.95
COL11A2P13942 AC004840.1-201ENST00000636359 365 ntBASIC20.96■□□□□ 0.95
COL11A2P13942 AC093503.3-201ENST00000624917 2352 ntBASIC20.96■□□□□ 0.95
COL11A2P13942 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
COL11A2P13942 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
COL11A2P13942 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
COL11A2P13942 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
COL11A2P13942 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC20.96■□□□□ 0.95
COL11A2P13942 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
COL11A2P13942 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC20.95■□□□□ 0.95
COL11A2P13942 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
COL11A2P13942 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC20.95■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 25.5 ms