Protein–RNA interactions for Protein: P13569

CFTR, Cystic fibrosis transmembrane conductance regulator, humanhuman

Predictions only

Length 1,480 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFTRP13569 GPR148-201ENST00000309926 1267 ntAPPRIS P1 BASIC29.35■■■□□ 2.29
CFTRP13569 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC29.35■■■□□ 2.29
CFTRP13569 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC29.35■■■□□ 2.29
CFTRP13569 KRT17P7-201ENST00000451704 1104 ntBASIC29.35■■■□□ 2.29
CFTRP13569 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC29.35■■■□□ 2.29
CFTRP13569 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC29.35■■■□□ 2.29
CFTRP13569 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC29.35■■■□□ 2.29
CFTRP13569 AC018529.1-201ENST00000613063 361 ntBASIC29.35■■■□□ 2.29
CFTRP13569 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC29.35■■■□□ 2.29
CFTRP13569 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC29.35■■■□□ 2.29
CFTRP13569 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC29.35■■■□□ 2.29
CFTRP13569 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC29.35■■■□□ 2.29
CFTRP13569 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC29.34■■■□□ 2.29
CFTRP13569 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC29.34■■■□□ 2.29
CFTRP13569 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC29.34■■■□□ 2.29
CFTRP13569 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC29.34■■■□□ 2.29
CFTRP13569 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC29.34■■■□□ 2.29
CFTRP13569 NARF-206ENST00000457415 1668 ntTSL 5 BASIC29.34■■■□□ 2.29
CFTRP13569 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC29.34■■■□□ 2.29
CFTRP13569 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC29.34■■■□□ 2.29
CFTRP13569 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC29.34■■■□□ 2.29
CFTRP13569 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC29.34■■■□□ 2.29
CFTRP13569 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC29.34■■■□□ 2.29
CFTRP13569 MACROD2-AS1-201ENST00000439451 1230 ntTSL 1 (best) BASIC29.34■■■□□ 2.29
CFTRP13569 GPR53P-205ENST00000457298 1084 ntBASIC29.34■■■□□ 2.29
CFTRP13569 AL354710.2-201ENST00000468244 550 ntTSL 4 BASIC29.34■■■□□ 2.29
CFTRP13569 AL138918.1-201ENST00000568306 659 ntBASIC29.34■■■□□ 2.29
CFTRP13569 AC009407.1-201ENST00000568958 598 ntBASIC29.34■■■□□ 2.29
CFTRP13569 AC091167.2-201ENST00000579581 588 ntBASIC29.34■■■□□ 2.29
CFTRP13569 AL132655.2-201ENST00000596276 594 ntBASIC29.34■■■□□ 2.29
CFTRP13569 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC29.34■■■□□ 2.29
CFTRP13569 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC29.34■■■□□ 2.29
CFTRP13569 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC29.34■■■□□ 2.29
CFTRP13569 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC29.33■■■□□ 2.29
CFTRP13569 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC29.33■■■□□ 2.29
CFTRP13569 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC29.33■■■□□ 2.29
CFTRP13569 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC29.33■■■□□ 2.29
CFTRP13569 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC29.33■■■□□ 2.29
CFTRP13569 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC29.33■■■□□ 2.29
CFTRP13569 HILS1-202ENST00000545329 423 ntBASIC29.33■■■□□ 2.29
CFTRP13569 CDK4-206ENST00000549606 558 ntTSL 2 BASIC29.33■■■□□ 2.29
CFTRP13569 MPI-209ENST00000564003 1195 ntTSL 2 BASIC29.33■■■□□ 2.29
CFTRP13569 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC29.33■■■□□ 2.29
CFTRP13569 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC29.33■■■□□ 2.29
CFTRP13569 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC29.33■■■□□ 2.29
CFTRP13569 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC29.33■■■□□ 2.29
CFTRP13569 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC29.33■■■□□ 2.29
CFTRP13569 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC29.33■■■□□ 2.29
CFTRP13569 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC29.33■■■□□ 2.29
CFTRP13569 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC29.33■■■□□ 2.29
CFTRP13569 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC29.33■■■□□ 2.29
CFTRP13569 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC29.33■■■□□ 2.29
CFTRP13569 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC29.33■■■□□ 2.29
CFTRP13569 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC29.32■■■□□ 2.28
CFTRP13569 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC29.32■■■□□ 2.28
CFTRP13569 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC29.32■■■□□ 2.28
CFTRP13569 ATP6V0B-201ENST00000236067 944 ntTSL 2 BASIC29.32■■■□□ 2.28
CFTRP13569 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC29.32■■■□□ 2.28
CFTRP13569 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC29.32■■■□□ 2.28
CFTRP13569 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC29.32■■■□□ 2.28
CFTRP13569 ATP6V0B-211ENST00000498664 825 ntTSL 2 BASIC29.32■■■□□ 2.28
CFTRP13569 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC29.32■■■□□ 2.28
CFTRP13569 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC29.32■■■□□ 2.28
CFTRP13569 AC140912.1-201ENST00000577171 1054 ntBASIC29.32■■■□□ 2.28
CFTRP13569 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC29.32■■■□□ 2.28
CFTRP13569 GRAMD4P3-201ENST00000621665 1669 ntBASIC29.32■■■□□ 2.28
CFTRP13569 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC29.32■■■□□ 2.28
CFTRP13569 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC29.32■■■□□ 2.28
CFTRP13569 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC29.32■■■□□ 2.28
CFTRP13569 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC29.32■■■□□ 2.28
CFTRP13569 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC29.31■■■□□ 2.28
CFTRP13569 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC29.31■■■□□ 2.28
CFTRP13569 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC29.31■■■□□ 2.28
CFTRP13569 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC29.31■■■□□ 2.28
CFTRP13569 IFT20-203ENST00000395418 825 ntAPPRIS P4 TSL 1 (best) BASIC29.31■■■□□ 2.28
CFTRP13569 HNRNPA3P1-201ENST00000401429 1139 ntBASIC29.31■■■□□ 2.28
CFTRP13569 HNRNPA3P5-201ENST00000455201 833 ntBASIC29.31■■■□□ 2.28
CFTRP13569 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC29.31■■■□□ 2.28
CFTRP13569 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC29.31■■■□□ 2.28
CFTRP13569 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC29.31■■■□□ 2.28
CFTRP13569 IFT20-216ENST00000588477 774 ntTSL 5 BASIC29.31■■■□□ 2.28
CFTRP13569 AC004840.1-201ENST00000636359 365 ntBASIC29.31■■■□□ 2.28
CFTRP13569 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC29.31■■■□□ 2.28
CFTRP13569 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC29.31■■■□□ 2.28
CFTRP13569 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC29.31■■■□□ 2.28
CFTRP13569 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC29.31■■■□□ 2.28
CFTRP13569 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC29.31■■■□□ 2.28
CFTRP13569 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC29.3■■■□□ 2.28
CFTRP13569 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC29.3■■■□□ 2.28
CFTRP13569 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC29.3■■■□□ 2.28
CFTRP13569 AC105233.2-201ENST00000523697 349 ntBASIC29.3■■■□□ 2.28
CFTRP13569 AF228730.5-201ENST00000530288 346 ntBASIC29.3■■■□□ 2.28
CFTRP13569 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC29.3■■■□□ 2.28
CFTRP13569 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC29.3■■■□□ 2.28
CFTRP13569 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC29.3■■■□□ 2.28
CFTRP13569 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC29.3■■■□□ 2.28
CFTRP13569 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC29.3■■■□□ 2.28
CFTRP13569 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC29.3■■■□□ 2.28
CFTRP13569 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC29.3■■■□□ 2.28
CFTRP13569 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC29.3■■■□□ 2.28
Retrieved 100 of 98,524 protein–RNA pairs in 41.4 ms