Protein–RNA interactions for Protein: O95970

LGI1, Leucine-rich glioma-inactivated protein 1, humanhuman

Predictions only

Length 557 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LGI1O95970 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
LGI1O95970 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
LGI1O95970 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
LGI1O95970 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC16.07■□□□□ 0.16
LGI1O95970 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC16.07■□□□□ 0.16
LGI1O95970 RNF146-204ENST00000476956 884 ntTSL 2 BASIC16.07■□□□□ 0.16
LGI1O95970 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC16.07■□□□□ 0.16
LGI1O95970 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC16.07■□□□□ 0.16
LGI1O95970 AC090616.6-201ENST00000582640 721 ntBASIC16.07■□□□□ 0.16
LGI1O95970 AC005336.2-201ENST00000593183 939 ntBASIC16.07■□□□□ 0.16
LGI1O95970 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
LGI1O95970 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
LGI1O95970 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
LGI1O95970 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
LGI1O95970 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
LGI1O95970 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
LGI1O95970 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC16.07■□□□□ 0.16
LGI1O95970 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC16.07■□□□□ 0.16
LGI1O95970 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC16.07■□□□□ 0.16
LGI1O95970 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC16.07■□□□□ 0.16
LGI1O95970 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
LGI1O95970 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
LGI1O95970 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
LGI1O95970 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
LGI1O95970 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
LGI1O95970 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
LGI1O95970 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
LGI1O95970 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
LGI1O95970 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
LGI1O95970 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
LGI1O95970 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
LGI1O95970 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
LGI1O95970 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
LGI1O95970 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC16.07■□□□□ 0.16
LGI1O95970 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
LGI1O95970 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
LGI1O95970 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC16.06■□□□□ 0.16
LGI1O95970 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
LGI1O95970 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
LGI1O95970 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
LGI1O95970 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC16.06■□□□□ 0.16
LGI1O95970 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
LGI1O95970 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC16.06■□□□□ 0.16
LGI1O95970 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
LGI1O95970 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC16.06■□□□□ 0.16
LGI1O95970 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
LGI1O95970 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
LGI1O95970 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
LGI1O95970 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
LGI1O95970 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
LGI1O95970 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
LGI1O95970 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
LGI1O95970 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
LGI1O95970 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
LGI1O95970 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
LGI1O95970 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
LGI1O95970 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
LGI1O95970 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC16.06■□□□□ 0.16
LGI1O95970 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
LGI1O95970 ENSA-206ENST00000361631 725 ntTSL 2 BASIC16.06■□□□□ 0.16
LGI1O95970 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
LGI1O95970 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
LGI1O95970 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
LGI1O95970 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC16.06■□□□□ 0.16
LGI1O95970 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC16.06■□□□□ 0.16
LGI1O95970 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
LGI1O95970 AC011840.4-201ENST00000578471 627 ntBASIC16.06■□□□□ 0.16
LGI1O95970 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC16.06■□□□□ 0.16
LGI1O95970 AC011498.5-201ENST00000592027 486 ntBASIC16.06■□□□□ 0.16
LGI1O95970 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
LGI1O95970 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC16.06■□□□□ 0.16
LGI1O95970 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
LGI1O95970 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
LGI1O95970 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
LGI1O95970 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
LGI1O95970 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
LGI1O95970 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC16.06■□□□□ 0.16
LGI1O95970 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
LGI1O95970 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC16.06■□□□□ 0.16
LGI1O95970 AC105020.1-201ENST00000435356 2205 ntBASIC16.06■□□□□ 0.16
LGI1O95970 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
LGI1O95970 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
LGI1O95970 AC092053.1-201ENST00000605787 1936 ntBASIC16.06■□□□□ 0.16
LGI1O95970 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
LGI1O95970 PKD1P1-201ENST00000458669 6805 ntBASIC16.05■□□□□ 0.16
LGI1O95970 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
LGI1O95970 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
LGI1O95970 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
LGI1O95970 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
LGI1O95970 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC16.05■□□□□ 0.16
LGI1O95970 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC16.05■□□□□ 0.16
LGI1O95970 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
LGI1O95970 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
LGI1O95970 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
LGI1O95970 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC16.05■□□□□ 0.16
LGI1O95970 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC16.05■□□□□ 0.16
LGI1O95970 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
LGI1O95970 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
LGI1O95970 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC16.05■□□□□ 0.16
LGI1O95970 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC16.05■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 23.5 ms