Protein–RNA interactions for Protein: O94782

USP1, Ubiquitin carboxyl-terminal hydrolase 1, humanhuman

Predictions only

Length 785 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP1O94782 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
USP1O94782 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
USP1O94782 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
USP1O94782 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
USP1O94782 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC17.62■□□□□ 0.41
USP1O94782 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
USP1O94782 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
USP1O94782 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC17.62■□□□□ 0.41
USP1O94782 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
USP1O94782 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
USP1O94782 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
USP1O94782 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
USP1O94782 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
USP1O94782 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC17.62■□□□□ 0.41
USP1O94782 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC17.62■□□□□ 0.41
USP1O94782 AC011498.5-201ENST00000592027 486 ntBASIC17.62■□□□□ 0.41
USP1O94782 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC17.62■□□□□ 0.41
USP1O94782 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC17.62■□□□□ 0.41
USP1O94782 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC17.62■□□□□ 0.41
USP1O94782 AL138831.2-201ENST00000606564 490 ntBASIC17.62■□□□□ 0.41
USP1O94782 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC17.62■□□□□ 0.41
USP1O94782 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC17.62■□□□□ 0.41
USP1O94782 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
USP1O94782 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
USP1O94782 RHBDF1P1-201ENST00000427504 1941 ntBASIC17.62■□□□□ 0.41
USP1O94782 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
USP1O94782 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
USP1O94782 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
USP1O94782 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC17.62■□□□□ 0.41
USP1O94782 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC17.62■□□□□ 0.41
USP1O94782 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
USP1O94782 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
USP1O94782 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC17.62■□□□□ 0.41
USP1O94782 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
USP1O94782 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
USP1O94782 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
USP1O94782 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
USP1O94782 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC17.61■□□□□ 0.41
USP1O94782 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
USP1O94782 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
USP1O94782 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
USP1O94782 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
USP1O94782 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
USP1O94782 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC17.61■□□□□ 0.41
USP1O94782 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC17.61■□□□□ 0.41
USP1O94782 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
USP1O94782 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
USP1O94782 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC17.61■□□□□ 0.41
USP1O94782 AL845331.1-201ENST00000424978 1190 ntBASIC17.61■□□□□ 0.41
USP1O94782 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
USP1O94782 AC122714.2-201ENST00000502787 707 ntBASIC17.61■□□□□ 0.41
USP1O94782 IGHV3-52-201ENST00000519770 353 ntBASIC17.61■□□□□ 0.41
USP1O94782 KRT8P26-201ENST00000534154 1276 ntBASIC17.61■□□□□ 0.41
USP1O94782 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC17.61■□□□□ 0.41
USP1O94782 AC005336.2-201ENST00000593183 939 ntBASIC17.61■□□□□ 0.41
USP1O94782 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
USP1O94782 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC17.61■□□□□ 0.41
USP1O94782 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC17.61■□□□□ 0.41
USP1O94782 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC17.61■□□□□ 0.41
USP1O94782 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC17.61■□□□□ 0.41
USP1O94782 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC17.61■□□□□ 0.41
USP1O94782 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC17.61■□□□□ 0.41
USP1O94782 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
USP1O94782 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
USP1O94782 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
USP1O94782 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC17.61■□□□□ 0.41
USP1O94782 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
USP1O94782 PCDH8P1-201ENST00000428983 2773 ntBASIC17.61■□□□□ 0.41
USP1O94782 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC17.61■□□□□ 0.41
USP1O94782 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC17.61■□□□□ 0.41
USP1O94782 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
USP1O94782 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
USP1O94782 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
USP1O94782 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
USP1O94782 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
USP1O94782 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
USP1O94782 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
USP1O94782 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
USP1O94782 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
USP1O94782 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
USP1O94782 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
USP1O94782 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
USP1O94782 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
USP1O94782 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC17.6■□□□□ 0.41
USP1O94782 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
USP1O94782 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC17.6■□□□□ 0.41
USP1O94782 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
USP1O94782 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
USP1O94782 AL031133.1-201ENST00000406807 723 ntBASIC17.6■□□□□ 0.41
USP1O94782 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC17.6■□□□□ 0.41
USP1O94782 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
USP1O94782 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
USP1O94782 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC17.6■□□□□ 0.41
USP1O94782 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC17.6■□□□□ 0.41
USP1O94782 AC109462.3-201ENST00000573934 613 ntBASIC17.6■□□□□ 0.41
USP1O94782 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC17.6■□□□□ 0.41
USP1O94782 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC17.6■□□□□ 0.41
USP1O94782 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC17.6■□□□□ 0.41
USP1O94782 NDUFV2-AS1-203ENST00000608008 779 ntBASIC17.6■□□□□ 0.41
USP1O94782 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms