Protein–RNA interactions for Protein: O00458

IFRD1, Interferon-related developmental regulator 1, humanhuman

Predicted RBP Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFRD1O00458 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
IFRD1O00458 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.34
IFRD1O00458 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.34
IFRD1O00458 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
IFRD1O00458 AL355312.1-201ENST00000407115 2176 ntBASIC17.21■□□□□ 0.34
IFRD1O00458 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC17.21■□□□□ 0.34
IFRD1O00458 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
IFRD1O00458 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
IFRD1O00458 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
IFRD1O00458 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
IFRD1O00458 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
IFRD1O00458 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
IFRD1O00458 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
IFRD1O00458 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC17.2■□□□□ 0.34
IFRD1O00458 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC17.2■□□□□ 0.34
IFRD1O00458 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
IFRD1O00458 MED16-201ENST00000269814 1199 ntTSL 5 BASIC17.2■□□□□ 0.34
IFRD1O00458 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
IFRD1O00458 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
IFRD1O00458 MYCLP1-201ENST00000372451 1075 ntBASIC17.2■□□□□ 0.34
IFRD1O00458 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
IFRD1O00458 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC17.2■□□□□ 0.34
IFRD1O00458 RBM17P3-201ENST00000417687 1192 ntBASIC17.2■□□□□ 0.34
IFRD1O00458 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC17.2■□□□□ 0.34
IFRD1O00458 NKTR-203ENST00000442970 646 ntTSL 2 BASIC17.2■□□□□ 0.34
IFRD1O00458 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
IFRD1O00458 UNC93B7-201ENST00000509439 705 ntBASIC17.2■□□□□ 0.34
IFRD1O00458 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC17.2■□□□□ 0.34
IFRD1O00458 AC109462.3-201ENST00000573934 613 ntBASIC17.2■□□□□ 0.34
IFRD1O00458 RN7SL510P-201ENST00000581311 263 ntBASIC17.2■□□□□ 0.34
IFRD1O00458 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
IFRD1O00458 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
IFRD1O00458 REXO1L6P-202ENST00000619970 1078 ntBASIC17.2■□□□□ 0.34
IFRD1O00458 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC17.2■□□□□ 0.34
IFRD1O00458 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
IFRD1O00458 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
IFRD1O00458 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
IFRD1O00458 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC17.2■□□□□ 0.34
IFRD1O00458 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
IFRD1O00458 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
IFRD1O00458 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
IFRD1O00458 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC17.2■□□□□ 0.34
IFRD1O00458 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
IFRD1O00458 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
IFRD1O00458 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC17.2■□□□□ 0.34
IFRD1O00458 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC17.2■□□□□ 0.34
IFRD1O00458 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC17.2■□□□□ 0.34
IFRD1O00458 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
IFRD1O00458 AC009053.2-201ENST00000563701 2365 ntBASIC17.2■□□□□ 0.34
IFRD1O00458 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
IFRD1O00458 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
IFRD1O00458 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
IFRD1O00458 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
IFRD1O00458 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
IFRD1O00458 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC17.19■□□□□ 0.34
IFRD1O00458 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
IFRD1O00458 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
IFRD1O00458 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC17.19■□□□□ 0.34
IFRD1O00458 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC17.19■□□□□ 0.34
IFRD1O00458 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC17.19■□□□□ 0.34
IFRD1O00458 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
IFRD1O00458 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
IFRD1O00458 SOD2-201ENST00000337404 991 ntTSL 2 BASIC17.19■□□□□ 0.34
IFRD1O00458 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC17.19■□□□□ 0.34
IFRD1O00458 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC17.19■□□□□ 0.34
IFRD1O00458 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
IFRD1O00458 RBSN-204ENST00000449050 903 ntTSL 2 BASIC17.19■□□□□ 0.34
IFRD1O00458 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC17.19■□□□□ 0.34
IFRD1O00458 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
IFRD1O00458 IRF8-202ENST00000562492 946 ntTSL 3 BASIC17.19■□□□□ 0.34
IFRD1O00458 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC17.19■□□□□ 0.34
IFRD1O00458 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
IFRD1O00458 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC17.19■□□□□ 0.34
IFRD1O00458 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC17.19■□□□□ 0.34
IFRD1O00458 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
IFRD1O00458 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
IFRD1O00458 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC17.19■□□□□ 0.34
IFRD1O00458 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC17.19■□□□□ 0.34
IFRD1O00458 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
IFRD1O00458 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
IFRD1O00458 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
IFRD1O00458 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC17.19■□□□□ 0.34
IFRD1O00458 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
IFRD1O00458 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC17.19■□□□□ 0.34
IFRD1O00458 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
IFRD1O00458 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC17.18■□□□□ 0.34
IFRD1O00458 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC17.18■□□□□ 0.34
IFRD1O00458 AL121761.2-201ENST00000598007 1648 ntBASIC17.18■□□□□ 0.34
IFRD1O00458 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
IFRD1O00458 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC17.18■□□□□ 0.34
IFRD1O00458 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
IFRD1O00458 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
IFRD1O00458 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
IFRD1O00458 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC17.18■□□□□ 0.34
IFRD1O00458 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC17.18■□□□□ 0.34
IFRD1O00458 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
IFRD1O00458 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
IFRD1O00458 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC17.18■□□□□ 0.34
IFRD1O00458 AC005104.2-201ENST00000427818 678 ntBASIC17.18■□□□□ 0.34
IFRD1O00458 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC17.18■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 35.9 ms