Protein–RNA interactions for Protein: A6NDA9

LRIT2, Leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein 2, humanhuman

Predictions only

Length 550 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRIT2A6NDA9 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
LRIT2A6NDA9 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC16.53■□□□□ 0.24
LRIT2A6NDA9 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
LRIT2A6NDA9 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
LRIT2A6NDA9 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC16.52■□□□□ 0.24
LRIT2A6NDA9 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
LRIT2A6NDA9 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
LRIT2A6NDA9 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC16.52■□□□□ 0.24
LRIT2A6NDA9 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
LRIT2A6NDA9 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
LRIT2A6NDA9 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC16.52■□□□□ 0.24
LRIT2A6NDA9 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
LRIT2A6NDA9 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
LRIT2A6NDA9 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC16.52■□□□□ 0.24
LRIT2A6NDA9 AL450487.1-201ENST00000426799 995 ntBASIC16.52■□□□□ 0.24
LRIT2A6NDA9 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC16.52■□□□□ 0.24
LRIT2A6NDA9 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
LRIT2A6NDA9 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC16.52■□□□□ 0.24
LRIT2A6NDA9 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC16.52■□□□□ 0.24
LRIT2A6NDA9 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC16.52■□□□□ 0.24
LRIT2A6NDA9 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
LRIT2A6NDA9 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
LRIT2A6NDA9 AL022326.1-202ENST00000641533 845 ntBASIC16.52■□□□□ 0.24
LRIT2A6NDA9 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
LRIT2A6NDA9 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
LRIT2A6NDA9 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC16.52■□□□□ 0.23
LRIT2A6NDA9 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC16.52■□□□□ 0.23
LRIT2A6NDA9 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.23
LRIT2A6NDA9 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC16.52■□□□□ 0.23
LRIT2A6NDA9 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.23
LRIT2A6NDA9 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC16.52■□□□□ 0.23
LRIT2A6NDA9 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC16.52■□□□□ 0.23
LRIT2A6NDA9 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.23
LRIT2A6NDA9 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
LRIT2A6NDA9 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
LRIT2A6NDA9 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.23
LRIT2A6NDA9 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
LRIT2A6NDA9 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC16.51■□□□□ 0.23
LRIT2A6NDA9 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
LRIT2A6NDA9 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
LRIT2A6NDA9 AC097637.2-201ENST00000624096 1997 ntBASIC16.51■□□□□ 0.23
LRIT2A6NDA9 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
LRIT2A6NDA9 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
LRIT2A6NDA9 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC16.51■□□□□ 0.23
LRIT2A6NDA9 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC16.51■□□□□ 0.23
LRIT2A6NDA9 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC16.51■□□□□ 0.23
LRIT2A6NDA9 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
LRIT2A6NDA9 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
LRIT2A6NDA9 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
LRIT2A6NDA9 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC16.51■□□□□ 0.23
LRIT2A6NDA9 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
LRIT2A6NDA9 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC16.51■□□□□ 0.23
LRIT2A6NDA9 EMBP1-201ENST00000458200 901 ntBASIC16.51■□□□□ 0.23
LRIT2A6NDA9 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
LRIT2A6NDA9 S100A2-206ENST00000497140 697 ntTSL 2 BASIC16.51■□□□□ 0.23
LRIT2A6NDA9 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC16.51■□□□□ 0.23
LRIT2A6NDA9 KRT126P-201ENST00000549467 1181 ntBASIC16.51■□□□□ 0.23
LRIT2A6NDA9 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC16.51■□□□□ 0.23
LRIT2A6NDA9 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC16.51■□□□□ 0.23
LRIT2A6NDA9 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
LRIT2A6NDA9 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC16.51■□□□□ 0.23
LRIT2A6NDA9 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
LRIT2A6NDA9 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
LRIT2A6NDA9 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
LRIT2A6NDA9 AP001094.4-201ENST00000579008 2176 ntBASIC16.51■□□□□ 0.23
LRIT2A6NDA9 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC16.51■□□□□ 0.23
LRIT2A6NDA9 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC16.51■□□□□ 0.23
LRIT2A6NDA9 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
LRIT2A6NDA9 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
LRIT2A6NDA9 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
LRIT2A6NDA9 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
LRIT2A6NDA9 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
LRIT2A6NDA9 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
LRIT2A6NDA9 AC106820.2-201ENST00000563775 3264 ntBASIC16.5■□□□□ 0.23
LRIT2A6NDA9 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC16.5■□□□□ 0.23
LRIT2A6NDA9 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
LRIT2A6NDA9 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC16.5■□□□□ 0.23
LRIT2A6NDA9 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC16.5■□□□□ 0.23
LRIT2A6NDA9 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC16.5■□□□□ 0.23
LRIT2A6NDA9 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC16.5■□□□□ 0.23
LRIT2A6NDA9 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
LRIT2A6NDA9 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
LRIT2A6NDA9 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
LRIT2A6NDA9 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC16.5■□□□□ 0.23
LRIT2A6NDA9 ACTG1P4-201ENST00000425123 1122 ntBASIC16.5■□□□□ 0.23
LRIT2A6NDA9 SCARNA2-201ENST00000458748 420 ntBASIC16.5■□□□□ 0.23
LRIT2A6NDA9 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC16.5■□□□□ 0.23
LRIT2A6NDA9 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC16.5■□□□□ 0.23
LRIT2A6NDA9 SART3-203ENST00000546611 1184 ntBASIC16.5■□□□□ 0.23
LRIT2A6NDA9 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC16.5■□□□□ 0.23
LRIT2A6NDA9 IRF8-202ENST00000562492 946 ntTSL 3 BASIC16.5■□□□□ 0.23
LRIT2A6NDA9 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC16.5■□□□□ 0.23
LRIT2A6NDA9 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC16.5■□□□□ 0.23
LRIT2A6NDA9 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC16.5■□□□□ 0.23
LRIT2A6NDA9 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
LRIT2A6NDA9 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
LRIT2A6NDA9 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
LRIT2A6NDA9 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
LRIT2A6NDA9 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
LRIT2A6NDA9 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 23.6 ms